Dreissena polymorpha (zebra mussel): 127841543
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Entry
127841543 CDS
T08834
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127841543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpol04131
]
127841543
Membrane trafficking [BR:
dpol04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127841543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
127841543
NCBI-ProteinID:
XP_052226396
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All DBs
Position
1:97452336..97496500
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AA seq
861 aa
AA seq
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MSIKAFELVPAIERVHRMSEKTKAQIECMDVCGKNLYIGTTDCFVLHYMLEERSNASGKV
LFHSNSQGQKHLALKKPIAQLKAASALNRILVLCDNTVSMLNMLDLEPAVGGAKIKGVTQ
FCLNESPVGNNPFCVEVCVALKKKQVALYTITEDRINHVKDMSLPEPASVISMDGHVVCA
ALLSQYCMLDYETGQQTDLFPIDTEHMRPLVKRVSREEFLLTGPSALGMFVTSEGISQRP
PLQWSENLISVGYVHPYILAMNDEFITVHSILDQQQKQAIPFQGGVIMNDYDGRIFIAST
KEIYSLVPVAWEKQVQGLLADKRTQEALDLTRNANHGLTRDNFLKKFKRIQQQAAFIEFS
RRNLAEAQELFKNGQVDVRELISLYPRLMPSTSNFQRSVPGLHEIADVNQLARGDKQVVE
EYKNFLRRYLEDIRGTVNARGFKQEIDVALLKLYAEINSPELLPLIEVDSGCDLKDCAEW
LENYERHHSLAMLCKYHGDNDKALNIWSRLVNGDIKDDLFPGFEFVVNFLSNLSDHDLVW
KYVEWALEKDQELSIKIFTERPAQEPPSERLRPDTVIDYLHRFPRAVVSYLEYLVFQKKL
EKEKYHTHLAVLYLENVLNLMKANGVKKEHIDMARSKLRTMLQVSNLYRVQLILGKAKEQ
EMHAECAILYGKLEDHEKALRILVHQLRDYAAAENYCIVNSEGRDLNYRKRLFHILLSVY
LDPANEKKELLVEPAIDLLNSNVTDFDVAKVIQIIPDTWSIAMLSLFLRRAVRTNMHGNR
MTHIERMMSRGENLLVKQTSIEDMREAIVMNEERPCAVCNRTFSDPSFVRYPNGVITHIH
CAKNKHVCPVTGKLFSTSKQS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaaagcatttgaacttgtgcccgcgatcgaacgggtacatcgaatgtctgaa
aagacaaaagcacagattgaatgcatggatgtctgtggcaagaacttgtacattgggaca
actgactgttttgttttacactacatgttagaggagagatcaaatgcaagtggcaaagtt
ttgtttcatagcaacagtcaaggacaaaagcaccttgctctgaaaaagcctattgcccag
ctgaaggcagcctctgctttgaatcgaatccttgtgctctgtgacaacactgtctccatg
cttaacatgctagatctagaaccggctgtgggaggagctaagatcaagggtgtgacccag
ttctgtctgaatgagtcacccgttggtaacaacccgttctgtgtggaagtctgtgtggcc
ttgaagaagaagcaggttgctttgtacaccatcacagaggaccgcattaaccacgtgaag
gacatgtcattacctgaaccagcatctgtcataagcatggacggccatgtggtgtgtgca
gcactgctgtcgcagtactgcatgctggactatgagaccggtcaacagacggacctcttc
cccatagacacagagcacatgaggcccttggtcaaacgagtcagcagggaggagttcctg
ttgacgggccccagtgcactgggcatgtttgtgacctcggaagggatctcccagcgaccc
ccactacagtggtccgagaacctcatatcagtgggatatgtgcatccatacatacttgcc
atgaatgatgagtttatcactgtgcatagtattctggaccagcagcagaagcaggccata
ccgttccaaggaggggtgatcatgaacgactatgatgggcgaatattcattgcctcaact
aaagaaatatactcactagtgcctgtagcctgggagaaacaagtgcagggtctgctggct
gacaagaggacccaggaggcccttgatctgaccaggaatgccaaccacgggctcaccagg
gacaactttctcaagaaattcaagcgtatacaacagcaggcagcatttattgagttttct
cgtagaaacctagcagaagctcaggagttatttaaaaatggccaggtggatgtaagggag
ttgatcagcctgtacccaagacttatgccgagcaccagtaatttccagcgtagtgtgccg
ggactgcacgagattgcagatgtgaaccagctagccaggggagataagcaggtggtggag
gagtacaagaactttctgagaagatacctcgaggacatcagagggactgtaaacgccagg
ggctttaaacaggagattgatgttgccttattgaaactatatgcagagatcaactctcca
gagttacttcccctgatcgaggtagactcgggctgcgaccttaaggactgtgctgagtgg
ctcgagaattatgagcgccaccactcactagctatgctctgtaaataccatggtgataac
gataaagctctaaatatatggtctagacttgttaatggtgatattaaagatgatcttttc
ccagggtttgaatttgttgtcaactttttgtcgaatttaagtgatcatgatttggtatgg
aaatatgttgaatgggcattagaaaaagatcaagaacttagtataaaaatctttactgag
cggcctgcgcaggagcccccgtcagagaggctgagacctgacactgtgatagactacctg
caccgcttccccagggccgttgtctcatacctcgaataccttgtctttcaaaagaaactt
gagaaagaaaaataccatacccacttagctgtgctgtacctggagaatgtactcaacctc
atgaaagccaacggtgtgaagaaggagcacattgacatggccaggtctaagctgcgtacc
atgctgcaggtgtccaacctgtacagagtacagcttatactgggcaaggccaaggagcag
gaaatgcatgcagagtgtgccatactttatgggaaactagaggaccatgagaaagccctg
cggatcctcgtgcaccagttacgagactatgcagcggcagagaactactgcatcgtgaac
tctgaggggcgtgacctcaactacaggaagaggctcttccacatcctcctaagtgtctac
ctggacccagcaaacgagaaaaaagaactgcttgtggagcctgcaatcgaccttcttaac
agcaatgtgactgattttgatgttgctaaggtgatccagatcatcccagacacatggtcg
atagcgatgctgtccttgtttctgaggagggcagtgcggaccaacatgcatggcaaccgc
atgacccacattgagaggatgatgtcaaggggagagaaccttctcgtcaagcagaccagc
atcgaagacatgcgagaagccattgtgatgaacgaagaaaggccatgtgcagtgtgcaat
agaacattttctgatccatcatttgttagatacccaaatggagtgataacacacatacat
tgtgctaaaaataaacatgtgtgcccagtgactggaaagctgttcagtaccagtaaacag
tcatga
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