Dreissena polymorpha (zebra mussel): 127843809
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Entry
127843809 CDS
T08834
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127843809
03016 Transfer RNA biogenesis [BR:
dpol03016
]
127843809
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127843809
Spliceosome [BR:
dpol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127843809
Transfer RNA biogenesis [BR:
dpol03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
127843809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
127843809
NCBI-ProteinID:
XP_052229581
LinkDB
All DBs
Position
9:complement(43507853..43589127)
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AA seq
731 aa
AA seq
DB search
MTAFEEMGVMPEIARAVEEMDWSLPTDVQAEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQIVFETLKDQQEGKTSKLSTKNKGASLSWKLNIYDRGDAMAIEPDGLLCQSRDQQKWHG
TRTNKAVVGQGRYYYEATVTDEGLCRVGYSTDKASLDLGTDRWGWGFGGTGKKSNSKQFD
SYGEPFGLNDTIGCYLDLMKREVRWSKNGVDLGKAYDLPAQAANEKFFAAVVLKNAEMTF
NFGGTPFKYPPPQGFISLTGASKESTVESTQSAVPASSAKAATNAPQAIIIEPSRELAEQ
TLVQIQKFKKFLESPIPRELLVVGGVNVKEQVDVLMRGVDIVCGTPGRLEDLISTGKLAL
SACRFFVLDEADGLLSQGYGDLINRIHGQIPKVTNDGKRLQMVVCSATLHSFDVKKMAER
LMYFPTWIDLKGQDSVPETVHHCVVIVDPLKDTTWKGLRQHVETDGVHYEDKIQPHGTSQ
ETYSEAVKILKGEYTVRALEEHKMDRALIFCRTKVDCDNMEKYLQLRGQGKFSCVCLHAD
RKPQERKDNLQKFKDGKVKFLICTDVAARGIDVSGLPFVINVTLPDEKQNYIHRIGRVGR
AERMGLAISLVASVKEKVWYHSNCQSKGRGCYNTNLTDRGGCCIWYNEPQLLADVEDHLD
ITIDQIQPDIKVPINEFDGKVTYGQKRKNTGSGYEGHVATLAPAVMELARLEKHAQTSYI
NLKYKKMSWTR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagaaatgggggttatgccagagattgcaagggcagtggaagaaatg
gactggagtttacccactgatgtgcaggctgaagccataccaatgattcttggtggtgga
gatgtgctcatggccgctgagacaggcagtggtaagacaggagcattttgtctgcccatc
ctgcagattgtgtttgagacccttaaagatcagcaagagggcaagaccagcaaactctcc
accaagaataaaggagcaagtctttcatggaagctgaacatatatgatcgtggtgatgcc
atggccattgaaccagacggccttctgtgccagagtagagaccagcagaaatggcatggt
acccgcaccaacaaggctgttgtgggacaagggcgttactactatgaggcgacggtgaca
gacgagggactgtgtcgagtaggctattccacagacaaggctagtctggacctcggcact
gaccgctggggctgggggtttggagggactggcaagaagtccaacagcaagcagtttgat
agctatggggagccttttgggctcaacgatacgattggttgttaccttgacttgatgaaa
cgtgaggtgcgttggtcgaagaatggggtggacctcggcaaggcgtacgaccttccagca
caggcagccaatgagaagttcttcgcagcagttgtcttgaagaatgcagaaatgaccttc
aactttggtggtacacccttcaagtacccgccaccccagggtttcatctcactgacaggg
gcttccaaggagagcactgtagagtccacgcagtctgcagtgccggcaagtagcgccaag
gcagccaccaacgctccccaggcgatcattatagaaccctctagagaacttgctgaacag
acactagtgcaaattcaaaagttcaagaagttcttggaaagtcccattccgagggagcta
ctggtggttggtggtgttaatgtgaaggaacaagtggacgtcctcatgcggggggtggac
attgtgtgtggtaccccaggtcgtcttgaagacctcatctccactggaaaactggccttg
tccgcttgcaggttctttgtgctggatgaagcggatggtctgctgagtcaaggatatggg
gacctgatcaatcgtatccacggccagatacccaaggttaccaacgacggcaagaggcta
cagatggtcgtttgctcagctacactgcactcttttgatgtgaaaaagatggcggagcgc
ttgatgtactttcctacatggattgacttaaagggccaggactctgtgccggagacagtc
caccactgtgtggtcattgttgaccctctaaaggacactacctggaaaggccttcgtcag
catgtggaaacagatggagtccactatgaggacaagattcagccccatggaaccagtcaa
gagacatattcagaggcagtaaagatcctgaagggagagtacactgtgcgtgcattagaa
gagcacaaaatggatcgggccctgatattctgtagaaccaaggtcgactgtgacaatatg
gaaaaatatcttcaactgcgaggccaagggaaattttcctgcgtctgtctgcatgctgat
cgcaagccgcaggaaagaaaagataatctccagaagtttaaggatggtaaggtcaagttt
cttatctgcactgatgttgcagctcgtggcattgatgtctccggacttcctttcgtcatc
aatgttaccttgcctgatgagaaacaaaactatatccacagaattggtcgagttggacga
gcagaaagaatgggtcttgcaatatcattagttgcctcagtaaaagaaaaggtttggtac
cactctaactgccagtctaaaggccgtggatgttataacaccaacttgactgacagagga
ggctgttgtatctggtataatgagcctcagttgcttgcagacgtagaggaccatctagat
attaccatcgatcaaatccaaccagacattaaagtacctattaacgaatttgatggtaaa
gtcacatatggacaaaaacgcaaaaatacaggtagtggttacgagggtcatgtggccacc
ctggcgccggccgtcatggagttagcgcgtctggagaagcatgcacagacctcgtacatc
aacctgaagtacaagaagatgtcctggacgcgctag
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