Dreissena polymorpha (zebra mussel): 127844117
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Entry
127844117 CDS
T08834
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127844117
04121 Ubiquitin system [BR:
dpol04121
]
127844117
Enzymes [BR:
dpol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127844117
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127844117
Ubiquitin system [BR:
dpol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127844117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
SGL
zf-RING_UBOX
zf-B_box
DUF5128
TEN_NHL
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
Vgb_lyase
RING_XB3-XBAT31
zf-C3HC4_4
ANCHR-like_BBOX
DUF5711
NPV_P10
Motif
Other DBs
NCBI-GeneID:
127844117
NCBI-ProteinID:
XP_052230087
LinkDB
All DBs
Position
9:17543720..17550127
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AA seq
766 aa
AA seq
DB search
MASLSNAVGEHRVCSLCHEKYKDPRVLPCLHTFCRECLERRYHDQGFNDTLACPICRQST
SLSSGGVEGIPSSIFISNILDVMVSQDEYENGDLNTNFSESLCNCAEGSRATSLCKNCHE
YLCDNCVKAHQRVRLTKDHYIESLMNRGFPYQCQPAPVLNSPSLSTAQGDKHQTPCSKHE
NEILRVYCDTCLVPICRECTMTEHVGHSFIYLQDAIDNSRNVSKKLIADAKAGMKAIEEG
IQLTQGMAERVEVRSQSVTAEIRNITRRHMAALEERERDLLRRVEKIRQVKGKSLHMQID
ELKQGLVSLSRTVENVESVLNTGRDIDILKTNESMVNEMQKLRILRGLLLPHEDDSILFT
PPDAALLIAISKMGFISSSAYAPNCVAFGEGIKRALKGKLAAFAIQAKDHLGEQRVIGGD
PVQCIITSPDGTMYRTEVIDRQNGTYNVSYQPQIEGQHMISLMVNGKHIHESPFKVDVRS
GRNYATVGHMFAQFGGEGEDPGKLCRPWGICYHKDGYILVADRSNNRIQAFNLNGIYHHH
FGSSGTRNGQFDRPAGVASDIQGRVVVADKDNHRIQLFTIDGTFILKFGEKGNKNGQFNY
PWDVAVNSEGKILVSDTRNHRVQLFTGDGLFINKYGFDGAMWKHFDSPRGVCFNNEGQMI
VTDFNNHRLLVIHPDFQTARFLGTEGSANGQFLRPQGVVVDQEGNIIVADSRNHRVQVFQ
PSGNFLCKFGTPGSAPGQLDRPSGVCVAPDGRIFVVDFGNNRVEVF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggccagtttatcgaatgcggttggggagcatagagtgtgctctctatgtcatgagaaa
tataaggaccctcgggttttaccctgcttgcacacattttgtcgggagtgcctggaacgt
agataccacgaccaaggctttaacgatacccttgcatgtccgatatgccgtcagtccaca
tcattaagctctggtggcgtggaaggtattccgtccagcattttcatatcgaatatccta
gatgtcatggtatcccaggatgaatacgaaaatggtgacttgaataccaacttctcggaa
agcttgtgcaactgtgccgaaggtagcagagcaacctcactgtgcaagaattgtcacgag
tacctttgtgataactgcgtaaaggcccatcaacgagtcagattgaccaaagatcactac
atagagagcctaatgaacaggggatttccttaccaatgccaaccagccccagtgttgaat
tccccaagtctttccactgcacaaggtgataaacatcaaaccccttgttctaagcatgag
aatgaaattctgcgtgtttattgcgatacctgtctagttcccatatgcagagaatgtaca
atgactgaacatgttggccatagcttcatctacctccaagatgccatagacaactcccga
aatgtatccaaaaagcttatagcagatgcaaaagctggaatgaaagctattgaagaaggc
atacagcttactcaaggcatggctgaacgtgttgaagttcgctcacaatcggttacagca
gaaataaggaacataaccagacgtcatatggcagcacttgaagaacgtgaacgtgatctc
cttagacgtgtagaaaagattcgccaagtgaaaggtaaatctttacacatgcaaattgat
gaactgaaacagggacttgtaagcttgagtcggactgttgagaatgttgagtctgtgtta
aacacaggtagagatattgatatattgaagactaacgagagcatggtaaatgaaatgcaa
aaactgagaattctcagaggccttttgctaccgcatgaagacgacagtattttatttacc
ccgcccgatgccgcactcttgattgcaatatccaagatgggattcatttctagcagtgct
tatgctcctaactgtgttgcattcggtgaagggatcaagcgtgcccttaaaggaaaattg
gcagcctttgcaattcaagccaaagatcatcttggtgaacagcgtgtgattggtggggat
cctgtccagtgcatcattactagtccggacggtaccatgtacaggactgaggtgatagac
cgacaaaacggtacctacaatgtatcataccaaccacaaatcgagggacagcacatgatt
tccctgatggtcaatggcaaacatattcatgagagcccatttaaggtcgatgtgagaagt
ggccgtaactatgccacagtgggccatatgtttgcccagtttggtggagaaggagaagac
ccaggcaagctttgtcgcccatggggaatttgttaccacaaagacggctacattcttgtt
gctgatagaagcaataaccgcattcaggcttttaatctgaacggcatctatcaccaccac
tttgggtcatctggcacgaggaatggtcagtttgaccggccagctggtgtggcttcggac
atccagggacgtgtagtggttgcagacaaggacaatcaccgcattcagctcttcaccatt
gatggtacattcatccttaagtttggtgaaaagggaaataaaaatggccagttcaattac
ccatgggatgttgcagtgaattcagaagggaaaatattagtgtccgatacacgaaaccat
cgtgttcagttgttcactggtgacggcttgttcatcaataagtatggatttgatggtgct
atgtggaaacatttcgactctccccgtggtgtgtgtttcaacaatgaaggtcagatgatt
gttactgatttcaacaatcatcgccttctagttattcatcccgatttccagacagcccgc
tttctaggaacagagggcagtgccaatggacagtttcttcgccctcagggtgtagtcgtg
gatcaggaaggaaacatcatcgttgctgattctcgcaatcatagagttcaagtatttcaa
ccaagtggcaacttcctgtgcaaattcggcactcccgggtcggcccctggtcagcttgac
cggccatcaggtgtctgcgtcgcaccagatggtcgcatttttgttgttgattttggtaat
aatcgtgtggaagtattttaa
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