KEGG   Dreissena polymorpha (zebra mussel): 127847867
Entry
127847867         CDS       T08834                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
dpol  Dreissena polymorpha (zebra mussel)
Pathway
dpol03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127847867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpol03041]
    127847867
Spliceosome [BR:dpol03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    127847867
 Complex C
   U5 SnRNP specific factors
    127847867
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 eIF2A WDR90_beta-prop_4th Ge1_WD40 Beta-prop_SPT8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD_LRWD1 Beta-prop_WDR19_1st RMC1_N Beta-prop_HPS5 Beta-prop_WDR75_2nd Nbas_N PEP5_VPS11_N Beta-prop_NWD2_C Beta-prop_Nup120_160 PD40 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 127847867
NCBI-ProteinID: XP_052236039
LinkDB
Position
10:64787925..64806056
AA seq 345 aa
MDAKRKAMDGALVPAKRPRNELVAVNERDGALLQSGMQRLSNLEAPIMLLTGHEGDIFCT
KFSPDGKMLASAGFDRLIYFWNVYGECENFAVLKGHTGAIMEIQFSTDGTSLISAATDKT
MSLWDVDVGTRIKKFKGHNGFVNCCSIARRGPQLVCSGSDDQTIKLWDCRKKGVLQTFQN
TYQVTSITFSDTSEQIFSGGIDNDIKVWDLRKNDVLYRMRGHADTVTGMHLSPDGSYLLT
NSMDNTVRIWDVRPFAPQERCVKIMQGHQHTFEKNLLRCAWAPDGSKVGAGSGDRFVYIW
DTTSRRILYKLPGHAGSVNEVVFHPEEPIVASCGSDKKIFLGEIE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggacgcaaaacgaaaagcgatggacggggcattagttccagcaaaacgtcctagaaat
gaattggtagctgttaacgaaagagatggtgcacttttacaaagcggaatgcagagactc
tcaaatctagaggcgcctataatgctgttgactggccatgaaggagatattttctgtacc
aagttctccccggatggaaagatgctggcgtcagcaggctttgatagacttatatatttc
tggaacgtgtatggggaatgcgaaaactttgcagtgttaaaaggccacactggtgccatc
atggaaattcagttttccacagatgggacatcattgatatcagcagccacagacaagacc
atgtcattatgggacgtagatgtgggaacgagaattaagaagttcaaaggtcacaatggc
tttgtcaactgttgcagtattgcaaggcgaggaccacagcttgtttgcagtggcagtgat
gaccaaactataaaactctgggactgcagaaagaaaggtgtccttcagacattccagaac
acataccaagtcacatcgataacgttctcggatacctctgaacagatattctctggggga
atagacaatgacataaaggtctgggatcttcgtaagaatgatgttctctaccgtatgcga
ggccacgcagacacagtcactggcatgcatctttctccagatggatcataccttctcaca
aactccatggataatactgttcgtatttgggatgtacgtccatttgccccacaagagcga
tgtgtgaaaattatgcagggtcatcaacacacatttgaaaagaacctgttgcgttgtgcc
tgggcaccagatggcagcaaggttggggcgggctccggggaccggtttgtgtacatctgg
gacaccacgtcccgcaggatcctctacaagctacccgggcatgcgggctctgtgaacgag
gtcgtcttccaccccgaggaacccattgttgcctcttgtggaagtgacaaaaagattttc
cttggagaaatagaatga

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