KEGG T08834: 127848364

Dreissena polymorpha (zebra mussel): 127848364

Entry

127848364         CDS       T08834

Name

(RefSeq) ATP-dependent DNA helicase RecQ-like

K03654

ATP-dependent DNA helicase RecQ [EC:5.6.2.4]

Organism

dpol Dreissena polymorpha (zebra mussel)

Pathway

dpol03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:dpol00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127848364
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpol03019]
    127848364
   03400 DNA repair and recombination proteins [BR:dpol03400]
    127848364
Enzymes [BR:dpol01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     127848364
Messenger RNA biogenesis [BR:dpol03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     127848364
DNA repair and recombination proteins [BR:dpol03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      127848364

SSDB

Motif

Pfam:

DEAD Helicase_C RecQ_Zn_bind ResIII

Other DBs

NCBI-GeneID:

127848364

NCBI-ProteinID:

XP_052236746

LinkDB

Position

10:complement(21717126..21723137)

AA seq 421 aa
MHVLNRHDIMSILPTGYGKSLIFQVAPFALKEKFKLTCSVCLILTPLNSIMMDQINALSK
QGISACWLDYNCQSGQTAASVEDSSDEEDTAKGESVVNVPLEDIIKGKYSLVYSHPEAFL
STTNGTAILSAFERDRTVSCIAVDEAHMILEWGNDFRKDFGRIGSDLLARFTDIPIMVFT
ATASPDAQTKICKSLQLKSPKIVCMNPDRTNIKYIKIERPPSSNTDDHLDKILEPMVSQL
LEEKDKYPLTIIYTDTNVISYAYAFSEKKMEKDQYLGENIPESRLFAQYHMNYTEKMKKF
IVSELGKENCKIRLIFATVALGMGLNAPHIRVVIHYKPPTSIESYFQETGRAGRDGLPSK
AILYYNNTDIRKNRPGIQQNIIDYCKNDSRCLREVMLKTFGCPKSENIKDCCCACDEMKK
E

NT seq 1266 nt +upstreamnt +downstreamnt
atgcatgttttgaatagacacgatatcatgtctatattgccgactgggtatgggaaaagt
ctgatctttcaagtggctccatttgcattgaaagaaaagttcaagttgacttgttcggtt
tgtttaattttgacacccttaaacagtatcatgatggaccagatcaatgcattgagcaaa
cagggaataagtgcgtgttggctagactataactgtcaaagtggtcagaccgcagcaagt
gtcgaagacagttctgacgaggaagatactgctaagggcgaaagtgttgtcaatgtacct
ttagaagatataattaaaggaaagtactcattggtgtattcccatccagaagcatttctg
agcacaacaaatggaacagcaatattgagtgcatttgagagagatagaactgtttcatgc
attgctgttgatgaagcccacatgatccttgaatggggaaatgacttcaggaaagatttt
ggcaggattggctctgatcttctggcaaggtttacagacattcccataatggtcttcact
gctacagcttcccctgatgcccagacaaaaatctgcaaaagtcttcaactaaagagtcca
aaaatagtttgtatgaaccctgatagaacaaatattaagtacataaagattgaacgacct
ccatcctcaaacactgatgaccatttagacaagatccttgaacctatggtgagccagctg
ctagaagaaaaagataaatatccattaactattatttacacagacacaaatgtaatcagt
tatgcatatgccttttctgaaaaaaagatggagaaagatcagtacttaggagagaatatc
ccagaaagtagactttttgctcaataccacatgaactacaccgaaaaaatgaagaaattc
atcgtgagtgaattaggaaaagaaaactgcaagataagacttatttttgctacagtagca
ttaggtatgggactcaatgcaccccatataagagttgtcatacactacaaaccaccaacc
tccatagaaagttacttccaggaaactggaagggctggaagagatggcctcccaagtaaa
gcaattctgtactataacaatactgacattcgaaaaaacagaccaggaattcaacaaaat
atcatagattactgtaaaaatgactcaagatgtttacgagaagttatgttgaaaaccttt
ggttgcccaaaaagtgaaaacataaaggactgttgttgtgcatgtgatgagatgaagaaa
gaataa

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