Dreissena polymorpha (zebra mussel): 127851202
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Entry
127851202 CDS
T08834
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127851202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpol03009
]
127851202
Ribosome biogenesis [BR:
dpol03009
]
Eukaryotic type
Pre-60S particles
RNases
127851202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
Med15_N
KIX_2
Motif
Other DBs
NCBI-GeneID:
127851202
NCBI-ProteinID:
XP_052240789
LinkDB
All DBs
Position
11
Genome browser
AA seq
1224 aa
AA seq
DB search
MFSSKGLFKDVSCPYFLFGLCERPYCHFKHSKQEEAKARVEIEKLSNLYTGSDDSTTNGL
PVSSLQRTLKDIEQSIQTEKSILGNHSKPSGVTKNKPTGTPSYNPTPLNELEQKKNKGEL
GSGRSKYDLALLDGPSSDGEYDPASNFSTNLTSVASTSTLSRESPSDFAKPVVAGIKRKS
ETEDGNEDSCSLAKIPKFASVSYSPAVAEGSFSDEEHSGIPDGFLSDDQSEKARGSGLKS
DTTKSCDKKSDLLKENNDIALSKEISPIEFNPDGTVNYPDRSAEDEKLKPKGKDATNEDV
KSDKSDENIFSLFKQEFDSVLEGCANIDEQKPCIKTDHNVIKKSHSSGKCRVTNDKETVL
GHKSSHHKSKSEKHKHKEITNSHDKIKSSACTPNKSDNTANFNHKDKSCSSNKESSSHNS
LSTRQRKDSEKSSSSVVKNGMTKSSSSSKKHSHSDLKHNHRDSKHSHSDSKHSHSNSLKS
EQKHKHERMSSKDHSRTSSKDSTDKSSSSASKHNTSSDKSSKHGQHKSHHRSSSSQSHSH
PSSKTKSHSSSKSNSHHSSSKSKSAKQSTILSPTSSKKKQILNLDVDLFGDIDSDIEQPS
RTADYDSDLEKLFEDDDPFDECLRIFNEENAKQASTSGGEKKKLKRPHEPRHCPCICDRQ
EEGCSKRVGSGQDVRKKKLEDRPQPKPSPAQVMLNRYKAMQEKALQEENERKEKMKAKVK
EIQEKNKDTLSSVSGLTKPSLASASATFTTYMAARNKKTSAVTAAKGIQRQAHTPTVPIA
TLKRPTVEVNTSSKVPTNVRQRYLNMFIDECLKICPNEEQAYKKAKEEEEAVFTRCSNKK
IYLNLVVNTIKRYRTEAQAQNSGKVEQKTPVKLSHASLLDGSGPGASKTTYTLHRSGGAG
RVQGEDFTGAELYKRLTPYVLTEEQLKENNFPRPHSTRGGAAKFYSEVKTTQKGSTKGYE
KLCVRCGKVFEVYPNGKYPVRQECVYHWGKAWKKKIAGNIDTRYTCCQGDLTSEGCQVAK
LHVHETNKREIVADMEEVNSGFMKTIPCSPAPDGDYGVYALDCEMVYTTMGVELARVTVV
GADLEPVYESLVMPDNRIVDLNTRFSGISEEDLEDVHTSLRDVQAVLLSLFTDKTILLGH
SLESDLLALKLIHSTVVDTSVVFPHRMGLPFKRALKNLMAEYLKKIIQDDVSGHDSLEDA
TACLQLMQHKLKDDARKEGRRLST
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttttccagtaaaggcctttttaaggatgtatcatgtccctatttcctttttgggctc
tgcgaacggccgtattgtcatttcaaacattcaaagcaagaagaagcgaaagccagagta
gaaatagaaaaattatctaatctctacacaggcagtgatgacagcacgacaaatggtcta
ccagtctcctcacttcagaggactctgaaggacatagaacagagcattcagacggagaaa
agcattctgggaaatcacagcaagcctagtggagtgacaaaaaataagcctacaggaaca
ccttcatataatcctacacccttgaatgaacttgagcagaaaaaaaacaagggtgaactt
ggctcaggcagatccaaatatgatctagcactacttgatggaccttcttctgatggcgaa
tatgacccagccagcaacttctcaacaaatttgacatcagtggcatccacctcaactctc
tcaagagaatcaccttcagactttgctaagcctgtagttgcaggaatcaaacgcaagtca
gagactgaagatgggaacgaggacagttgtagtttggcaaagattccaaagtttgcctct
gtgagttacagcccggctgtagctgagggaagtttctcagacgaagagcattctggtatt
ccagacggatttttgtctgatgatcaaagtgagaaagctagagggtctggattaaaaagt
gataccaccaagagttgtgataaaaagtcggatttattaaaggaaaacaatgacattgct
ttgagtaaagaaatttcgccaatagaatttaacccagacggaactgttaattatcctgat
agaagtgctgaagatgaaaagctgaagccaaaaggcaaggatgccactaatgaagatgta
aaatctgacaaatcagatgaaaatatatttagtttattcaaacaggagtttgatagtgtt
ctagaaggttgtgctaatatagatgaacaaaaaccttgtataaaaacagaccacaatgta
ataaagaagtctcattcgtcagggaaatgtcgagttactaatgacaaagaaacagtatta
ggccataaatcgtctcatcataaatctaaaagtgaaaaacataaacataaagaaattact
aattcccatgacaaaataaagtcaagcgcatgtactcctaataaatctgataatactgca
aattttaatcataaagacaagtcttgttcttctaataaagaatccagttctcataattca
ttatcaaccagacagagaaaagacagtgaaaagagttcctcgtcagttgtcaaaaatggc
atgacaaaatcatcaagctcatcaaaaaaacatagtcatagtgatttgaaacataatcat
agggattcaaaacatagtcatagtgattcaaaacatagtcatagtaattctttgaaatct
gaacaaaaacataaacacgaaaggatgtcgtccaaggatcattctcgtacctcatcgaag
gattctacagacaaatcatcatcatctgcttcaaaacacaacacatccagtgacaaaagc
tcgaaacatggtcaacataaatctcatcacagaagcagctctagtcagtcacacagtcat
ccatcatcgaaaacaaaatctcattctagctctaaatcgaatagtcatcactcttcttca
aaatcaaaatctgccaaacagtctacaattctctcaccgacatcctccaaaaagaagcag
attctgaatctagatgttgacttgtttggggatattgacagcgacatagagcagccgtca
cggaccgctgactatgactcagacttggagaaattgtttgaagatgatgatccttttgat
gaatgtctgaggattttcaatgaagaaaatgccaaacaggcttcaactagcggtggcgaa
aaaaagaaattgaagcgacctcatgagcctagacactgcccctgcatctgtgataggcaa
gaagagggttgctctaaaagagtcggatccggccaggatgtgcggaagaaaaaacttgaa
gatcgaccacagccaaagccttcccctgcccaggtcatgttgaacaggtacaaggccatg
caggaaaaagcactacaagaggagaatgagaggaaagagaaaatgaaggccaaagtgaaa
gaaatacaggaaaaaaacaaagataccttatcttctgtcagtggtttaaccaagccatct
ctagccagtgcctctgctacattcaccacatacatggcggcccgcaacaagaagacatca
gccgtcactgctgcaaaggggatccagcgccaggctcacacacccactgtgcctattgca
actctcaagaggccaacagtggaggtgaacaccagctccaaggtgcccaccaatgtccgc
cagagatacttgaacatgttcatagacgagtgtctcaagatatgtcccaatgaagaacag
gcgtacaagaaggctaaggaggaggaggaggctgtgttcacacgctgctctaacaagaag
atctacctcaacctcgttgtcaacaccatcaagcggtaccgcacagaggcccaggcacaa
aacagtggcaaggtagaacagaagacccctgtgaagctatcgcatgcctcgttgctggat
ggttctggtcccggggcgtccaagaccacatacacactgcaccggtctgggggggctggt
agggttcaaggagaggacttcactggtgctgagctttacaagagactcacgccgtatgtg
ttgacagaggagcaactgaaagagaacaatttccctcgcccacactccacccgtggggga
gcggccaagttctactccgaggtgaaaaccactcagaaaggcagcacaaaaggctatgag
aaactgtgcgtgcgttgtggcaaggtgtttgaggtctatcccaacggcaagtaccccgtc
aggcaggagtgtgtctaccactggggcaaggcttggaagaagaaaattgcaggtaacatc
gacacaaggtacacatgttgccagggagacttgacctcggaaggttgccaggttgccaag
ctgcacgttcatgagaccaacaagcgggagatagtggctgacatggaggaggtcaactcg
ggcttcatgaagaccataccgtgctcgcctgctccagacggggactatggagtctacgca
ctcgactgtgagatggtgtacacaacgatgggtgtagagctggcacgggtcactgtggta
ggtgcagacctggaacctgtgtacgagtccctggtgatgcctgacaaccgcattgtagac
ctcaacaccaggttcagtggtatatcagaggaggacctggaggatgttcacacctctctg
agggacgtgcaggctgtactgctgtccctgttcacagacaagaccatcctgctggggcac
agccttgagtcagatctactggctctcaagctgatccacagcacagtggttgacacctcg
gtagtgtttcctcatcgtatgggtctgcccttcaagagagctctcaagaacctcatggct
gaatacttgaagaagatcattcaggatgacgtcagcggccatgacagtttggaagatgca
acagcatgtctgcaactgatgcagcacaaactcaaggatgatgcaagaaaggaggggagg
agactctctacatag
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