Dreissena polymorpha (zebra mussel): 127852333
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Entry
127852333 CDS
T08834
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127852333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpol03400
]
127852333
DNA repair and recombination proteins [BR:
dpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127852333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
DUF3888
Motif
Other DBs
NCBI-GeneID:
127852333
NCBI-ProteinID:
XP_052242231
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All DBs
Position
12:50611239..50649926
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AA seq
929 aa
AA seq
DB search
MALQPNQELKLDLSQEQGFLAYYRTLPEKSGTTIRFFDRSDYYTVHGQDALFVAKDVFKT
NTVVKYLGSGEKKVESVCLSKMNFEALVRDLLLVRQYRVEVYKNKGGAKNNEWSLGYKAS
PGNLTQFEDILFGSSDMSNSVGVVAVKLSSDNGQRVIGVGYADATLRKFQVSEFTDNDQF
SNLEALLVQLGPKECLVAMGDTASEAGKLKQVLERSGVMVTERKRSEFTNKDSVQDLNRL
LKMKKGEQGNAAALAELEKQHAMSSLSAVIKYLELLSDESNFGQYSLSTFDLGQYMRLDT
AAVRALNLLPSALEGGNKNQSVLGLLNRCRTAQGQRLLGHWVKQPLVDVNKIGERLNIVE
ALVEDTDLRQMLYEDQLRKIPDFQRLAKKFQRKRANLQDVYRVYQAIDKMPFLLETLEKT
DHAHRGLLMDIFSNPLKELLMDFAKYQEMVEATMDLNQVDNHEFVIKADFDEGLTALKER
IDSLEESIKGQINKVARDLGLEPNKVLKLESNAQLGYYFRVTLKEEKVLRNNKNYITIDT
KTNGVRFHNKAVREFNEEYLKAKEEYTEQQKSVVMEVVNIAAGYVEPMLVMNDILAQLDV
LVSFAQISTCAPIPYVRPVIREKGSGVIRLMEARHPCLEMQDDIAFIPNDVSFQRDREMF
HIITGPNMGGKSTYIRSVGVIVLMAQLGCYVPCSEAEITIVDSVLARVGAGDSQLKGVST
FMAEMLETAAILRSATDNSLIIIDELGRGTSTYDGFGLAWAISEHIATKLNSFCLFATHF
HELTALADKVPTVNNLHVTALTSNNTLTLLYKVKPGVCDQSFGIHVAELAHFPKHVVEFA
REKACELEDYQSISLSGTGMEGEDEPAVKKRKLVKQEGEQLIADFLAKVKALPVDKLTDK
ELEEKVESFKKEIKAKKNSYIEDILARKS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcaaccgaaccaagaattaaagcttgatttgtcccaggagcaggggttcctg
gcctactacagaactttgccagagaaatcgggcaccacaatcagattctttgacagatct
gactattacactgtccatgggcaagatgctttgtttgttgctaaggatgttttcaagaca
aacactgttgtcaagtacctaggctcaggggagaagaaagtggagtcagtgtgcctcagc
aagatgaactttgaggcccttgtgcgtgacctactgttggtgagacagtatcgagtagaa
gtgtacaagaacaagggaggagccaagaacaacgagtggagtcttggatacaaggcctcc
ccgggcaatctgacccagtttgaggacatcttgtttggcagttctgacatgtcaaactct
gtcggagtggtagcggtgaaactgtcctctgataacggacagcgggttataggggtgggg
tatgctgatgccacactgagaaagttccaagtctctgaattcacagacaacgatcagttc
tcaaatcttgaggcgctgttagtgcagctgggacccaaggaatgcctggtggccatgggc
gacacagccagtgaggcgggcaaactgaaacaggtcctggagagaagtggtgtcatggtt
acagagaggaagagaagtgagtttacaaacaaggacagcgtccaggacctgaacaggctg
ctcaagatgaagaaaggggagcaaggcaatgcagcagctctcgctgaattagaaaaacag
cacgcaatgtcttccctgtcggcagtcatcaagtatctggagctactgtcagatgaaagc
aactttggccagtactcactgtccacgtttgaccttggtcagtacatgagactggacaca
gcggctgtgcgggcattgaatctcctgcccagtgccctggaaggtggcaataagaaccag
tctgttttgggtctactgaatcgatgtcgtactgcgcagggtcagaggttactaggtcac
tgggtcaaacagcctctagtggacgtcaacaaaataggtgagcgactgaacatcgttgag
gccctggtggaggacacagacctgagacagatgctgtacgaggaccagctgaggaagata
ccagacttccagaggctggcaaagaagttccagaggaaaagggcaaacctccaggatgtg
taccgtgtgtaccaggccattgacaagatgccgttcctgttggagaccctggagaagaca
gaccacgcacaccgaggcctgctcatggacatcttctcaaacccactcaaggagttactg
atggactttgctaagtaccaggagatggtggaggccacaatggacctgaatcaggtggac
aaccacgagtttgtaatcaaggcagactttgacgagggcttgactgcattgaaggagagg
attgactcactggaagaaagtatcaagggacagattaacaaggtggccagagatctgggt
ctagagcccaacaaagtgctcaagctggagagtaacgcacagctgggatactacttccgt
gtgaccttgaaagaggaaaaagtgctaagaaacaacaagaactacatcaccatagataca
aagaccaatggggttcgcttccataacaaggctgtcagagaattcaacgaggagtatttg
aaagctaaagaagagtacacagagcagcagaagagtgtggtgatggaagtggtcaacatt
gcagctggctacgtggagccgatgttggttatgaatgacattctcgcccaactggacgtt
ctggtcagctttgcccagatttccacgtgtgccccgataccctatgtgagaccggtcatc
agggagaaaggctcaggagtgatccgattgatggaggcccggcatccatgcctagagatg
caggatgatattgcattcatccccaacgatgtctcatttcagagagatagagaaatgttt
cacatcattactggcccaaacatgggaggaaagtcaacctacattcgctcagtgggagtg
atagtattgatggcccagctcggctgctatgtgccctgtagtgaggcagagatcacaata
gttgacagcgtgctagccagggtgggggccggggacagccagctcaagggagtctccacg
ttcatggcagagatgctggaaacggccgccattctcagatcggccactgacaattctctc
ataatcatagatgaactcggcagaggtacttcaacctatgatggctttggattggcctgg
gcaatttctgaacacattgccacgaagctgaactcgttctgtctgtttgcgactcacttc
catgagctcacggccctagctgacaaggtgcccactgtgaacaatctccatgtgaccgct
ctgacctccaacaacacgttgacgctcctgtacaaagtgaaaccaggtgtttgtgaccag
agttttggaatccatgtggcagagctggcacatttccccaagcatgtagtcgagtttgca
cgtgaaaaggcatgtgagctggaggactatcagtctatcagtctgtctggcactggaatg
gagggggaggatgaacccgcggtgaagaaacgaaaactggtgaaacaggaaggagaacaa
ctcattgcagactttttagccaaggtgaaagcacttccagtggacaagctgacagacaaa
gaacttgaagagaaagtagaaagttttaagaaggaaatcaaggccaagaagaattcttac
atcgaggatattttggcacgaaagtcttga
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