Dreissena polymorpha (zebra mussel): 127853412
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Entry
127853412 CDS
T08834
Name
(RefSeq) cleavage stimulation factor subunit 3-like isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127853412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127853412
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127853412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
127853412
NCBI-ProteinID:
XP_052243900
LinkDB
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Position
12:complement(61325120..61369752)
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AA seq
707 aa
AA seq
DB search
MSKQDGFIADKVKKAEKRVEVSPHDTEAWSVLIRDAQIKTIEQARPMYEKLVTQFSNAGR
YWKIYVEHELKSKNYERVEKLFQRCLIKILNIDLWKLYITYIKDTKGKLPSYREKMAQAY
DFALDKMGMDIMSSSIWSDYINFLKSVDAVGSYAENQRITAVRKVFQRGVINPMINIEQL
WKDYGHYENSINPLIAKKMVEDRARDYMNARRVSKEYEVVTRGLNRNLPSVPPTNTPEEA
TQVELWKKYITWEKENPLRTEDQALITKRVMFAYEQCLLCLAYHPDVWIEAANYLEQSSQ
LLTEKGDQNAGKLFADEAAALFERAITTTMKENTLIYFTYADFEECRMKYEKIHSIYKRC
IAVETMDPTLAYIQYMKFARRSEGIKSARQVFKLAREDKRSTYHVFMAAALMEYYCSKEK
TVALKIFELGLKKFGDIPEYIRAYVDFMSHLNEDNNTRVLFERVLSSGQIAPEKSIDIWS
RFLAFESEVGDLASIIKVEKRRSQAIEKIQEFGGKETALLIDRYKYADLFPCSQSELKAL
GYHDLIRKQVVQMPSSRVAKIVMEEEESKKRPEYPKPDLNQWLPFKPKILVPKDAHIVPG
GVFPPPDAAASLMAMMPPPECFHGPFVKMDMFLEHFKQLEIPDAPIIENGFDGPIKYDAG
TLLSLEYASGRKRRITENEGSDEEDSNMGPAPPVNDIYRSRQQKRAK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaggatggttttattgctgacaaagtgaagaaggcagagaagcgcgtggaa
gtctctccccatgacacagaggcatggagtgtgcttatcagagatgctcagataaagact
atcgagcaagcacggcccatgtatgagaaacttgtgacccagttcagcaacgctggacgc
tactggaagatatacgttgaacacgagctgaagtcaaaaaactacgagagagtagaaaag
ctgttccagcgatgcctgattaaaattctcaacatagacttatggaaactctacatcact
tacatcaaagacaccaagggcaaattaccctcgtacagggagaagatggcgcaggcatac
gactttgctctggacaagatgggcatggatatcatgtcctcctctatctggagtgactac
atcaacttcctcaagtctgtcgatgccgtgggctcgtatgcagaaaaccagcgtatcacc
gcggtgcgtaaggtgttccagaggggtgtcatcaacccaatgatcaacatagagcagctc
tggaaggactatggccactatgaaaatagtatcaatccgctgattgctaagaagatggta
gaggaccgggcacgtgactacatgaacgcccgccgggtctccaaggagtatgaggtggtc
acacggggattgaaccgcaacctgccctctgtgccgcccaccaacacccctgaggaggct
acacaggtggagctgtggaagaagtacatcacctgggagaaggagaacccgctacggaca
gaggaccaggcgcttattacaaaacgagtgatgtttgcatatgagcagtgcctgctgtgc
ctggcctaccacccagatgtgtggatagaggcagccaattatctggaacagtccagtcag
ctgctgacagagaaaggggaccagaatgcaggcaagctgttcgctgatgaagcggctgcc
ctgttcgagcgggcgattaccaccaccatgaaggagaacactctcatctacttcacatat
gctgactttgaggagtgtcgtatgaagtatgagaagatacacagtatctacaagagatgt
attgcagtggaaaccatggatccaacactggcatacatacagtacatgaagtttgcccgt
cgttcggagggcatcaagtcggcccgtcaggtgttcaaactggctagagaggacaaacga
tccacataccatgtgttcatggcagcagctcttatggagtattactgcagtaaggagaag
acagtagcactgaagatatttgaactgggtttgaagaaatttggtgatatcccagaatac
atcagggcatatgtggacttcatgtcacatctcaatgaggacaataacaccagggtgttg
tttgagagggttttgtcttctggtcagatagcccctgagaagtccatagatatctggagt
cggttcctggcgtttgagtcagaagtgggggacctggccagtataatcaaggtggagaag
cggcgttcacaggcaatagagaagattcaggagtttggaggcaaggaaacggctctgttg
atagaccgctacaagtatgctgacctgttcccatgtagccagtcagagctcaaggcactt
ggatatcatgacctgatcaggaagcaggtggtacagatgccgtccagcagggtggccaag
attgtgatggaggaggaggagagcaagaaacgccccgagtatcccaagcctgatctgaac
cagtggctgcccttcaaaccaaagattcttgtcccaaaggacgcccacatagttcctggt
ggagtgtttcctccgcctgatgcagctgcctcactgatggccatgatgccccctccagag
tgctttcatggaccatttgtgaagatggatatgttcttggagcactttaagcagcttgaa
atcccagatgcacccatcatagagaacggctttgacggaccaatcaagtatgatgccggt
accctgctttcactggagtacgcgtctggtcgcaaacgacgaatcacggagaacgaggga
agtgacgaagaagactcaaacatgggtcctgcaccccctgtcaacgacatctaccgcagt
aggcagcagaagagggccaagtga
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