Dreissena polymorpha (zebra mussel): 127854934
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Entry
127854934 CDS
T08834
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol04140
Autophagy - animal
dpol04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127854934
04148 Efferocytosis
127854934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpol04131
]
127854934
Membrane trafficking [BR:
dpol04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
127854934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_CDC20-Fz
WD40_WDHD1_1st
zf-RING_Vps41
WD40_Prp19
WD40
WDR55
Beta-prop_HPS5
Clathrin
zf-RING_5
Beta-prop_EML_2
zf-UDP
zf_RING_Vps8_fungal
ANAPC4_WD40
zf-C3H2C3
TPR_7
zf_RING_Vps8
CedA
Motif
Other DBs
NCBI-GeneID:
127854934
NCBI-ProteinID:
XP_052246015
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All DBs
Position
13:27559732..27617136
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AA seq
870 aa
AA seq
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MATASHGEVQDEIKPVAESSDSEEGSEEGSDDSDEYDIEPQLRYDRISNDLQSILSKDCA
SCLAVDSKFLALGTHWGSIYILDFLGNKIPGKTYQTHTCTVNQISLDKNGDFVASCSDDG
KVKIQGLYSDVDDQSVTFDRPVKSVALDPEYYKASNRKFVTGDDRLILNERSLFSRHKMT
VLHQGEGTVRTIKWHGDFIAWSNNVAVQMYDMSTRCRITSISKDHNFRPDLHPCNLHWKD
DRTLLVGWANAVKECTVKDRKEQDVRDLPRRYAEIVTMFSTTDSMVCGIASMDDKMVLLT
YVKPEIQPGQDESKVPANRPNLRVVKPFMNYFEDISNDALSIRNYTTYRCNDYHLGYKCS
VEREDNQLYIVSPRDIVVARPRDMDDHVAWLIEHEEFEEALKETVDHEKELKKHTFQEVG
LKFIEYLLECKRYEDAAKLCVKVCKKNKALWEAQAYEFMKKGELKPLAPFIPREDPILTP
AIYEMILNQFLQTDQLTFLQLVKEWPHAIYNVQTIIKAVLDKMDNDRSNKPLLQALAELH
SYKKEFDKALAIYVRLKHKDVFLLINKYSLFENVSDKIVQLMEFDEENAVKMLMDNIDKI
PIDKVVRQLEKSPKYLYVYLHKLSLVDNQYILPYAGNMVKLYAEFDPPKLLPFLKSSVPY
PLDMALEEVGTRQFRREQVFLLGRMGNVKQALQLITDELGDVDHAIEFCKENNDQELWDD
LIQHSLDKPNFIRGLLNNIGTHVDPTQLIDKIRTGMEIPGLRDSLVKILQDYNLQISLRE
GCKKILVADSFGLMGRLIKTQKKAISLETSHVCQMCQERILVTEIRHASDIVVFFCSHAV
HEMCLPNGMETCPICTTQRRGPGSGAMFGK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcttctcatggggaagtgcaagacgaaataaaaccagtcgcagaatccagt
gactcagaagaagggtctgaggaaggatctgatgattctgatgaatatgatattgaacca
caactcagatatgacagaatatccaacgatcttcagagcatcctctccaaggactgtgcc
agctgtcttgctgttgattcaaagtttcttgccctggggacacactggggttcaatatac
atcctggatttcctgggaaacaagatacctgggaaaacatatcaaacacacacctgtaca
gtgaaccagataagccttgacaagaatggtgactttgttgctagctgctcggatgatggc
aaggttaagattcaaggtctttactccgatgtggacgaccagtccgtgacctttgaccgc
ccagtcaagtcagttgcactagacccggaatactacaaggcgtccaatcgaaagtttgtt
accggtgacgaccgcctgattcttaatgagcgcagcctatttagtcgtcacaagatgacc
gtgttacaccagggggagggaactgtgaggaccattaagtggcatggagacttcattgca
tggtccaacaacgtggcagtgcaaatgtacgacatgtccacccgatgcagaatcacctct
atctccaaggaccataacttccgccctgatcttcacccatgtaacctccattggaaggat
gatcgcaccctgctggttggatgggccaatgctgtcaaggagtgcacagtgaaggacaga
aaggaacaagacgtcagagaccttccacgcagatatgcagagatagtaaccatgttcagc
accacggacagcatggtgtgcgggatagcctccatggatgacaaaatggtgctactcaca
tacgtcaagccagaaatccaaccgggtcaagatgaaagcaaagtacctgctaatcgacca
aatctgcgtgtagtgaaacccttcatgaactactttgaagacatctccaacgatgcactg
tccatccgaaactatacaacctacagatgcaatgattaccaccttggttacaaatgttct
gttgagcgggaggataatcagctgtatatagtcagccccagggacattgtggtggcgaga
ccccgtgacatggacgaccatgtggcatggcttatagaacacgaggagtttgaggaagcc
ttgaaggagactgttgaccatgaaaaggagctgaagaaacatacattccaggaggtgggg
ttaaagttcatagagtatctattggagtgtaagcgatacgaggacgctgccaaactgtgt
gtgaaggtctgtaagaagaacaaggcattgtgggaggcccaggcatatgagttcatgaag
aagggcgaattaaagcccctggcccccttcatccctcgtgaggatcctattctgacccca
gctatctacgagatgatcctcaatcagttccttcagacagaccagttgacattcctgcag
ctggtcaaggagtggccccatgcaatctacaacgtgcagaccatcatcaaggccgtgttg
gacaagatggacaatgatcgcagcaacaagcctctcctccaggcgttggctgaactgcac
agttacaaaaaagaatttgacaaggctcttgcaatatatgtgaggttgaagcacaaggac
gtgttcctgctgataaacaagtacagcctgtttgagaacgtcagtgacaagattgtgcag
ctcatggagtttgacgaggagaacgctgtcaagatgcttatggacaacatagacaaaata
cctattgacaaggtagtgcgacagttagagaagagcccaaaatacttgtatgtgtacctg
cacaagttgtcgctggtagacaatcagtacatcctcccgtatgctggaaacatggtgaaa
ctgtacgcagagtttgaccccccaaagttacttccctttctgaagagtagtgtcccttac
cccctggatatggctctagaggaagtgggaaccaggcagttcagacgggagcaggtcttt
ttactgggccggatgggtaatgtgaagcaagccttacagctgatcacagacgagttagga
gatgtggaccatgccatagaattctgcaaggaaaacaacgaccaggagctgtgggacgac
ctcattcaacactctctggacaaaccaaacttcattcgtggtcttttgaacaacattggt
acacatgtggaccccactcaactgatcgacaaaatccggacaggaatggagataccaggc
cttagagattccctcgttaaaatcctacaagactacaacctccagatttctcttcgtgaa
ggctgcaagaaaattctagtggccgacagttttggtctcatgggtcgactcattaaaaca
cagaagaaagctatttcattggaaactagtcatgtctgccagatgtgccaagaaaggata
ttagtcacagagatacgtcatgccagtgatatcgtggtgttcttctgcagtcatgcagta
catgagatgtgtctaccaaacggcatggagacctgccctatatgcaccactcagagacgg
ggccctggcagtggagccatgtttgggaaataa
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