Dreissena polymorpha (zebra mussel): 127857774
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Entry
127857774 CDS
T08834
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127857774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127857774
Spliceosome [BR:
dpol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127857774
Complex C
U5 SnRNP specific factors
127857774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
HAT_PRP39_C
TPR_16
TPR_17
HAT_Syf1_CNRKL1_N
Suf
TPR_2
TPR_15
FAT
TPR_1
ARM_TT21_N
TPR_21
ARM_TT21_2nd
ARM_TT21
TPR_9
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
127857774
NCBI-ProteinID:
XP_052250391
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All DBs
Position
14:49635099..49698030
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AA seq
934 aa
AA seq
DB search
MSVQSLVSRKKKSFIGLPSPLGYVPGLGRGATGFTTRSDIGPARDADDISDDRHGPPIKK
SKEDEKDEEEDLNDANYDEFTGYGGSLCSKDPYDKDDEEADMVYEAVDKRMDEKRKERRE
KKLQEQIEKYRQERPKIQQQFSDLKRDLADVSMDEWLNIPEVGDARNRKQRNPRSEKFTP
VPDSVLGRAAAQASTSSVLSEREQKYGGLTTPYGTITPGLSTPGGATPGDIDMKKIGQAR
NTLMDIKLTQVSDSVSGQTVVDPKGYLTDLQSMLPSHGGDINDVKKARLLLKSVRETNPK
HPPAWIASARLEEVTGKIQAARNLIMKGCEECPKSEDVWLEGARLMPGDQAKAVVAQAVR
QLPQSVRIWSKASELETELKAKKKVYRKALENIPNSVKLWKLAVELEEEEDARIMLSRAV
ECCPTSVELWLALARLENYSNARKVLNKARENIPTDRLIWISAAKLEEANNNIPMVEKII
ERALNSLRANMVEVNREQWLKDAEDCEKAGSVFTCQAIVRAVIGVGVEEEDKKHTWMEDA
EACAVHGANECARAIYAYALSIFPSKKSIWLRAAYFEKNYGTRDSLEALLQRAVAHCPKA
EVLWLMGAKSKWLAGDVPAARSILALAFQSNPNSEEIWLAAVKLESENNEFERARRLLQR
ARNSAPTARVFMKSVKLEWCMGEIDNAKTLLEDATKHYPDFPKLWMMRGQIEDQAGRTSD
AREAYNQGLKKCPHSVPLWLLLSRLEERIGQLIKARSILEKARLKNPQTAELWLEAVRLE
NRAGMRNIAQNLMAKALQECPSSGTLWAEAIFMEPRPQRKTKSVDALRRCEHDANVLLAA
SKMFWAERKIVKAREWFNRTVKIDPDNGDAWANFYKFEMMHGDEESQSQVCKRCLGSEPR
HGENWCAVSKNIENWRLKTDEILPLVAESLAIPT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcagtcgcttgtcagtcgtaagaagaaaagttttattggattaccatcgcca
cttggctatgtacctggcttgggtcgaggtgccactggctttacaactcgatctgatatt
gggccagcaagagatgcagatgacatatctgatgaccgccatggaccgccaataaaaaaa
tccaaggaagatgagaaggacgaagaggaagacttgaatgacgcaaactacgatgagttc
acaggctatggaggcagtctgtgtagcaaagacccttatgacaaggacgacgaggaggcc
gacatggtgtatgaggccgtggacaaacgcatggacgagaaacgtaaagaacgcagggag
aaaaagctgcaggagcagattgagaagtaccgacaagagagacctaagattcagcaacag
ttttcagatctcaagcgagacctggctgatgtaagcatggatgagtggctgaacattccc
gaggtcggcgatgcacgaaacaggaagcagaggaatccacgctctgaaaagtttacgccc
gtaccagacagtgtgctgggtcgagctgctgcacaggccagcaccagcagtgtcctgtca
gagagagaacagaagtacggtggtctcaccaccccatatgggaccatcaccccaggcctc
agcacaccagggggggcaaccccaggagacattgacatgaagaagattggtcaggccaga
aacactctgatggacatcaagctgacccaggtatccgactcagtgagtggccagacagtg
gtggaccctaaaggttacctgacagacctgcagtccatgctgccatcacatggaggtgac
atcaatgatgtgaagaaggcccgccttttgctgaagtcggtgcgcgagaccaatccgaaa
cacccgccagcgtggattgcctctgctcgcctggaagaggtcacaggcaagatccaggct
gcgcgcaacctcatcatgaagggctgtgaggagtgccccaagtctgaggacgtatggctc
gagggagccaggctcatgccgggcgaccaggccaaagctgtggtggcccaggccgttaga
cagctgcctcagtctgtgaggatctggagcaaggcttctgaactggagactgagctcaag
gcaaagaagaaagtctacaggaaagccctggagaacattccaaactcagtgaagctgtgg
aagctggcagtggagcttgaggaggaggaggatgccaggattatgttaagtcgcgctgtc
gagtgctgtcccaccagtgtagagctctggctggccctagcccgccttgagaactactct
aatgcccgtaaggtgctcaacaaggcccgtgagaacatccccacagaccgactcatctgg
atcagtgctgccaaacttgaggaggctaacaacaacatacccatggtggagaaaatcata
gagagagcgctgaactctctgcgtgcaaacatggtggaggtgaacagggaacagtggctc
aaggacgcagaggactgcgagaaggcaggcagtgtgttcacctgtcaagccatagtgagg
gcagtgataggtgttggggtggaggaggaagacaaaaagcacacctggatggaagacgca
gaggcttgtgcagttcacggggctaacgagtgtgcacgggcaatctacgcctacgctttg
tctatcttcccaagtaagaagagcatttggctacgggctgcatactttgagaaaaactat
ggtactagggactcccttgaggctctcctacagagggcagtggcccattgtcctaaggcg
gaggttctctggttgatgggggcaaagtccaagtggctggctggtgacgtcccggcagct
agaagtatcctcgccttggccttccagtccaaccctaacagtgaggagatctggcttgct
gcagtgaaactggagtcagagaacaacgagtttgagcgtgccaggagactgctgcagcgt
gctagaaacagtgcccccacagctagggtgtttatgaagtcagttaagctggagtggtgc
atgggagagattgacaatgccaagactctgctagaggatgccaccaaacactaccctgat
ttccctaagctgtggatgatgaggggtcagatagaggatcaggccggcaggaccagtgat
gccagggaggcctacaatcaagggctgaagaagtgcccccattcggtgcccctgtggctg
ctgctctcccgcctggaggagaggataggtcagctgatcaaggcgcggtccatcctggag
aaggccagactcaagaacccccagaccgcggaactctggctggaggctgtacggctggag
aatcgggctgggatgaggaacattgcacagaatctcatggctaaagctcttcaggaatgc
ccctcctccggtacactgtgggcggaggcaatcttcatggagccccgcccccagagaaag
accaagtcagtggacgccctcaggaggtgtgaacatgatgccaatgtgctcctggctgca
tccaagatgttctgggcggaacggaagattgtgaaggctcgtgagtggtttaaccgtaca
gtgaagatagatccagataatggagatgcttgggcaaacttctataagtttgagatgatg
catggagatgaggaatcccagagtcaagtctgcaagcgctgtttgggttctgagccgcgg
cacggggaaaactggtgtgctgtctccaaaaacattgaaaactggcggttaaaaactgac
gaaatactgccccttgttgccgagagtttggcgatcccaacataa
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