Dreissena polymorpha (zebra mussel): 127857841
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Entry
127857841 CDS
T08834
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127857841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpol03400
]
127857841
DNA repair and recombination proteins [BR:
dpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127857841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
BUD22
nSTAND_NTPase5
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
127857841
NCBI-ProteinID:
XP_052250488
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Position
14
Genome browser
AA seq
1355 aa
AA seq
DB search
MGPKPTPSKQGNTLFSYFSKSPCPPAKEKIENTANDVLSPKKSPNRPAKKKPDIEESSSY
KPGDLIWGKLEGYPWWPSLVCNHPTEHTHYKAGKLPQIHVQFFDTPVSRAWIKQKNTRPY
KGSDDPDYGPGGPLHTKSAPVVRGVGEADKALKLTNEERMGLIVELLPSEDEDDEMDEEG
SNGEDDSKENMDVEDEEDSKSVKKTPSKSPAKGRRSQRSRAKRRRIILEDSDSEGHESGD
EFKPEAEEGSDDDDASSGVDTDDITSDDASEPDSPVKGSKKRKRPEPKSKWGPKTSRKTP
ASSTAKKALAGFSKGDSDDEAPESPKHSESKGSPIAMASPQVSTATKSKLAAFTASDGAG
SVGESSVVYQHLKYEFLQPDKIRDAQKRSKADEDFDPRTLYIPDSEKAKFTPAMRQWWDI
KSQHFDTVLFFKMGKFYELFHMDATIAVNELGLIYMKGDYAHSGFPEIAYGRYADTLVQR
GYKVARIEQTETPDMMTERCKNMSKAPTKFDKVVKREVCRITTRGTKTFSFLSGECSDSQ
STYLLALAEKDHDTDGCSVYGVCFVDTSIGKFHIGQFADDRHSSRLRTLLAHYPPVQILH
EKGHMSGRTQQVINSSLPSVLKEALSPKSEFWESSKTLKVLSEETYFRDGTEGELQWPAV
VKAMLSNSDALGCSAADEFSLAISSFGALTWYLQYCLLDEELLTMRNFERYEPLDSKEPQ
RRLASSVPVVDFSSKHMVLDGVTLANLDVTENGTTGTTEGTLLARLDTCHTPFGKRLFRQ
WLCAPLCNPASINDRLDAVEDLIGCQEVVAEVTDFMKKMPDLERLLSRIHTLGTAKSNKH
PDGRAIFYEDVTYSKRKIEDFLATLEGFKLSSKVARRFRDVVGNFKSKLLKQTLGIEGCS
ETGMFPDIQKDLDFFNNAFDHVKAKKEGVIVPSVGVDEEFDLATSDIGSTEDRLKQYLDR
QKTRLGCRSIVYWGTAKNRYQMEIPETAVKNVPNEYTLMSSKKGAKRYRTAEIEDMLAEL
TDAEERKDAALKDVMRRIFYNFDKRYKTWDTAVQCLSVLDVMLSLAQYSRCSDGAICRPD
IVIPSADVQPFVEIREARHPCVSRTFTGGDFIPNDTVIGIQDENENEEGSCSSSRVVLVT
GPNMGGKSTLMRQVGLVVIMAQMGCYVPADRCRLTPVDRVFTRLGANDRIMAGESTFFVE
LSETSAILQHATAHSLVLIDELGRGTATYDGTAIACAVVKELSTNIRCRTLFSTHYHSLV
EEFSHDKNIRLGHMACMVENEDETDPTQETITFLYKFTSGACPKSYGFNAARLASLPEEI
IKVAVAKAHEFESALAAMKSFRDIWRKPCKGTLSG
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgggacctaaacctaccccatcaaaacagggaaacacactgttctcttacttttcaaag
agtccatgcccacctgcaaaggaaaaaatcgagaacaccgcaaatgacgtgttgtcaccg
aagaaatctccaaatagacctgcgaagaaaaagccagatatcgaagagagtagcagctac
aagcctggggacctgatctggggcaagctcgagggttacccctggtggcccagtctggtg
tgtaaccaccccactgaacacacccactacaaggctggcaaactgccccagatccatgtg
cagttctttgacacacctgtctcacgagcctggatcaaacaaaagaatacaagaccctac
aagggctctgatgaccctgactatggtcccgggggcccactgcacacgaagagtgcccct
gtggtgagaggggtgggagaggcggacaaggcccttaaactgaccaatgaggagaggatg
ggactcattgtggagctcctgccatcagaagatgaggatgacgagatggatgaagagggt
tctaatggtgaggatgacagtaaagaaaacatggacgtcgaggatgaggaggacagcaag
tcagttaagaagactcccagtaagtcacctgccaaaggtcgcaggtcacagaggtcaagg
gccaaacggaggaggattattttggaggatagtgacagtgaagggcatgagtcaggagat
gagttcaagccagaagctgaagaaggcagtgatgatgatgacgccagtagtggtgttgac
acagatgacatcacctcagacgatgcttcggaaccagactctcctgtaaagggttcaaag
aagagaaaacgacctgaaccaaagtctaagtggggccccaaaacatcacgtaaaacccct
gcatccagtacagcaaagaaagcgcttgctgggttttcaaagggtgattctgatgatgaa
gcccctgaatcccctaaacacagtgaatccaagggctctcctattgccatggcatctcct
caagtcagcacagccacaaaatctaaactggcagctttcactgccagtgatggtgcaggg
tctgttggagaaagctctgtcgtgtaccagcatctcaaatatgagttcctacaaccagac
aagatcagggatgcccagaagagatctaaggcagatgaagacttcgatcctagaacactg
tatattccagacagtgaaaaggccaaattcaccccggccatgaggcagtggtgggacatt
aagagtcagcactttgacacggtcctcttcttcaagatgggcaagttctacgagctgttc
cacatggacgccaccatcgcggtgaatgaactgggtctgatctacatgaagggagactac
gcccactcgggtttcccagagatcgcgtatggtcgctatgccgacacgctggtgcagcgt
gggtacaaggtagcccgcattgagcagacagagaccccagatatgatgacagagaggtgc
aaaaacatgtccaaggcgcccactaagtttgacaaggttgtgaaacgtgaggtgtgccgc
atcaccacgcggggaaccaagacattcagcttcctgtctggggaatgctcagactcacag
tcaacctacctactggcactcgcagaaaaggatcatgacacagatggctgcagtgtgtat
ggggtgtgctttgtggatacctctatcggaaaattccatattggtcagtttgcagatgac
aggcatagctcccgactgcgaaccctcctggcgcactatccccctgttcagatcctgcat
gagaagggccacatgtccgggcgtacccagcaggtgatcaattccagtctcccctccgtg
ctgaaggaggccctcagcccaaaatcagagttctgggagagctccaagaccctcaaggta
ttgtcagaagagacgtacttccgtgatgggactgagggcgagctgcagtggcccgcagtt
gttaaggcgatgctgtccaacagtgatgccctgggttgttctgctgcagacgagttttct
ttagcaatcagctcctttggggccttgacatggtatctacaatactgcctcctagacgag
gaactcctcaccatgcgtaactttgagagatacgagcccctagacagcaaggagccgcag
cgcaggctggcctccagtgtgcccgttgtggacttctcctccaaacacatggtgctggac
ggcgtgacccttgcgaatcttgacgtcactgagaatgggaccacaggcaccacagagggg
acactgctggcaagactggacacatgccacacaccatttggtaagcggctgttccgtcaa
tggctatgcgcgcccctgtgtaaccccgcctccattaatgacagactggatgcagtggag
gatctcattggttgccaggaggtggttgccgaggtgaccgactttatgaagaaaatgccc
gacttggagcgactgctcagcaggatccacaccttgggcacggcgaagagcaacaagcac
ccggacggacgggccattttctacgaggacgttacatacagcaaaaggaagattgaggac
ttcttagccactcttgaagggttcaaattatcctcgaaagttgctcgaaggttcagagat
gttgtcggtaatttcaagtccaagctgctaaagcagaccctgggtattgagggttgctca
gagacgggaatgttcccggacatacagaaggacctggatttctttaataatgcctttgac
catgtgaaggccaagaaggaaggagtgatcgtgcccagtgtgggggtagacgaggagttt
gacctggccacgtcggatatcggctctaccgaggacaggctcaaacagtacctcgatagg
cagaagactagactgggatgcaggagtattgtgtactggggcacggctaagaatcgctac
cagatggagatacctgagactgctgtgaagaatgtccccaacgagtacaccctgatgtcg
tccaagaaaggggccaaaagatatcgcacagctgagattgaggacatgctggccgaactc
actgacgctgaggaacgcaaagatgctgccctgaaagacgtcatgaggagaatattttac
aactttgataagaggtacaagacatgggatacggctgtacagtgtctgtctgtgctggac
gtgatgctgtccctggctcagtacagcaggtgttctgatggcgccatctgcaggccagat
attgtgataccatctgctgacgtccagcccttcgtagagataagagaggcaaggcaccca
tgtgtgagtcgtaccttcacaggtggggatttcattcccaacgacacagttattggcatt
caagatgagaatgaaaatgaagaaggctcctgcagcagcagccgtgtggtgttggtgaca
ggtcccaacatgggtggcaagtctacgttgatgcgtcaggtggggctcgtggtgatcatg
gcccagatgggctgctacgtgccggctgacaggtgtagactcacacccgtggatagggtg
ttcacaaggctcggcgctaatgacaggatcatggcaggtgaaagcacattctttgtggag
ctgagtgaaacctctgccattctgcagcacgccactgctcactccctggtcctcattgat
gaacttggtcgcggtactgctacctatgatggcacggcgatagcctgtgcagttgtcaag
gagctttctacaaacatcagatgtcgaacactcttttccacacactaccattccctggtt
gaagaattctcccacgataagaatattcgccttggacatatggcttgcatggtagagaac
gaggacgagacagacccgacccaggagaccatcacgttcctgtacaagttcacgtctgga
gcctgtcctaagagttatggcttcaacgctgcacggcttgccagcctcccagaggagatt
ataaaggtggcagtagccaaagctcatgagtttgaatctgctctggcggcaatgaagtcc
ttcagagacatctggagaaagccttgcaaggggacattgtcaggttga
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