Dreissena polymorpha (zebra mussel): 127862718
Help
Entry
127862718 CDS
T08834
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127862718
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127862718
Spliceosome [BR:
dpol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127862718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
KH_DEAH11
GRP
KH_1
Motif
Other DBs
NCBI-GeneID:
127862718
NCBI-ProteinID:
XP_052257938
LinkDB
All DBs
Position
16:1934566..1973065
Genome browser
AA seq
575 aa
AA seq
DB search
MVSVVRDSDSDGFTSVTVSGSEDAMAKAEEMINDLTTDRGPPRHGGQRFGDQEPSGEAPR
QQINWGMILKDKEENDRKKFAALPPIKKNFYIESPEVANMHPSEVEMIRENNFNITVTNL
SKTSKSVPILSPTFEQAFEHYPEILDTIYNQNFGQPTPIQCQAWPVLLQGLDLIGIAQTG
TGKTLAFLLPAFIHIDGQPVPREERKGPNVLVLSPTRELALQIEEEVKKFSYKGIRSICV
YGGGNRREQIKVCTAGVEIIVATPGRLNDLVMNGIVNVTSVTYLVLDEADRMLDMGFEPE
IKKILLDIRPDRQTVMTSATWPLDVQRIGQSYLTNPIQVFVGSLDLAAVHTVTQRVEIVA
DEEKKERVMYFINNEMGPDDKVIIFVGKKVTADDLSSDFTLNGINCQCIHGDREQIDREQ
ALDDIKTGETRVLVATDVASRGLDVKDLTYVINYDMPRNIEEYVHRVGRTGRAGRTGTSL
SLLTRGDWSKARDLIKIMVEAQQEVPQELEEMAERYQQMREKRDAEGGGGGRGGRFGGRG
GGRDFGGGYGGGGSFGGGGRRRRDEGGIRMSFGIP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggtggtcagggacagtgacagtgatggcttcacgtccgtgacagtgtccggc
agtgaggatgccatggcaaaggcagaggagatgatcaacgatctgaccacagacagagga
ccacctcgccatgggggacagagatttggagaccaggagccaagtggggaggcaccgagg
cagcaaatcaactggggaatgatcctgaaggacaaggaggagaatgatagaaagaaattt
gcagctctccctcctatcaagaagaatttctacatagagagtcccgaggtagccaacatg
catcccagtgaagtggagatgatcagggagaacaattttaatatcactgtcactaacctg
tcaaaaacatcgaagagtgtgccaatcctgtcacccacatttgagcaggcctttgagcat
tatccggagattctggacactatctacaatcaaaactttggccagcccactcccatacag
tgccaggcctggccagtactgctacagggtctggatctgatagggattgctcagactggg
actggtaaaacgttggccttccttctgccggctttcatccacattgatggacagcctgtc
ccccgagaagagcgcaaaggccccaacgtgctggtgctgtcccccacccgtgaattggca
cttcaaatagaggaggaggtgaaaaagttctcatacaagggaatacgcagcatatgtgta
tacgggggtggcaaccggagagagcaaatcaaagtgtgcactgctggggtagagattatc
gtagcaacccccgggcgactaaatgaccttgttatgaacggaatagtcaatgtgacctca
gtaacttacctggtgctggacgaagctgaccgcatgctggacatgggatttgagcctgag
ataaaaaagattctgctggacatacggccggacaggcagactgtcatgaccagtgccaca
tggcccttagatgttcagcgtattggtcagtcctatctgactaaccccatccaggtgttt
gtgggatccctggatctcgctgctgttcacactgtaacacagagggttgagatagtggcg
gatgaagaaaagaaagagcgcgtgatgtacttcattaacaatgagatgggcccagacgat
aaagtgatcatcttcgttggcaagaaagtcacggcggatgatctctccagtgatttcact
ctcaatggaattaactgccagtgtatccatggagacagagaacagattgatagagagcaa
gcattggatgacattaagacgggtgagacccgtgtgctggtggccactgatgttgcatct
cgagggctggacgtaaaagatctcacgtatgttatcaactatgacatgcccaggaacatt
gaggagtatgtacacagagttgggcgaactgggagagcaggacgcacgggtacctccctg
tctctgttgacacgtggagactggtccaaggctagagatcttatcaagattatggtggaa
gcacaacaggaagttcctcaggagctagaggagatggctgaacgttaccagcaaatgagg
gagaagagggacgctgagggagggggagggggaaggggcgggagatttggggggcgtggg
ggtgggagagactttggtgggggatatgggggcggtggcagctttggagggggtgggagg
cgtaggagagatgagggtggcattcgaatgagcttcggcattccttaa
DBGET
integrated database retrieval system
