Dreissena polymorpha (zebra mussel): 127868683
Help
Entry
127868683 CDS
T08834
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpol04121
]
127868683
Ubiquitin system [BR:
dpol04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
127868683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
DNA_III_psi
Motif
Other DBs
NCBI-GeneID:
127868683
NCBI-ProteinID:
XP_052266584
LinkDB
All DBs
Position
2:complement(118633011..118688606)
Genome browser
AA seq
1817 aa
AA seq
DB search
MDFMFDWDNDGDRFSFDDSDRFEEESMCSWLSETESLNQNWRGWKRQNAGQASPPFSKTQ
DGRVLSLVELASQTVACNIPYGVVEKYPQPIPEPLQLRITYWSFPDCEEDIRLYSCLANG
SAEEFQKGDHLYKTKAVKNALQIGFHLSATVCPTNTAGQHNKDGFKVAILFDRRRISQCT
CTCNSNAFWCSHVVAVCLFRINQPSNVTQRVPVSESLAQLHRDQLQKFAQYLIAEMPKEI
LPIAQGLLDKLLSDQECDMNTQNGAPDPTAGAEANEETSWCLDEKQLHENVKKTLVKFCV
PSPVVFSDVNFLTQTTPPAAAEWQSLLRPLRGREPEGMWNLLSIAREMFRRSDHNAIPLM
EIITDEVLQCEQILIWWFMTKITNNNSNQISSRSSSNSSASITQHAASSLCDEIVNLWKL
AALNPKLSPAQKEDMCSKFKEWHVSTIEKVKRARNSNSGSASGTLKKTEIENFSGFKPGI
EACILQWDDYHIPGVTYSDSHKLSLPYRFNKMLDSDAKKPSRVQPMAVCSENLISTDDRT
TLAEATNMLNEHHSPQDIKNKRHRHPSRQGHNNDGAMSSGSEGFCEPDRGSSLFRDSDSG
SEMKEPGSRSNSLDDAEILFSINTQKSKQENLNLTTGNSLDNDEDCLMELGHGVAQGSAA
EAGNGAEDQGAGERQAQVDPAGEPLGDEYSMYFYDRNKASEMDKKKDKNEEPNVFAGVKC
LDNRQEISFARAEALHAHGHTKEACQLAQQLAEELLAFPPDLLAETAAVPSVKVKRKKAL
TNITMLASTTLSKAAFLAGVLLEEQEMWHLAFKMGMFVLEMPRPPASCKAMEVKLAYQET
ELLTLLKKIPLGPAEMAVLRQRAEQLKDGTIKSRGEALLPLTLASFIFDALCLGTCPMTL
ANVGCPRQPVQVTCRQAGDEKLGFEGCVAALGMKANVSEADHPLLCESTRKQRGELAMAM
LLNYKDDICKLSKIMDKLLDKEVHSQYKAHSLVSYLNPRQAASQPQASAAQQLSRHHSHD
PQRGPRGAQGRGGNTRSSELDEFPPTDDPRAGHSGPSSLGSGAPGARPKIYPTLTYGQSR
DTDSSAVEEEGDNSYKALEAKLKCMALKKKPSQGRAAIDSSAPETTSSDNSPTLVRRVWG
KPQGPGSDSGSSGDSDSLGSSSSGDKAELRAKLRDESPQAQINSRIAATSQFILDSRSST
PNLKGIRFKGKRIMPTIPNQPSEASAHWMWELAKTILNKAGGSSSTSQFIQPTNNTLPTG
PHRNLQLCSFQIGLYSLGLQNCVAPNWLSRTYSSHVSWISGQAMEIGSAAIHILIDTWEG
HLTAPEVASLADRASRGRDHNIVKAAAELALSCLPQAQALNPSEVQRALYQCKEQSKEML
EKACLAVESAAKGYSVYPEVLFHVAKRWYELAEEAARQSGGENHGRHSVESRNTAVPTQP
PSMARSASSPGHIDNTSPVNPSVVPFSNTPPMGNQVAMSGAQLIAHGNQLPPTVMVPFTI
PPVQSGPHHPHMQQQQTFVQPTYNIVQQIHQPFGCAAVLTNNSNASTVDASIVTFTYNNA
VHYNLPPTTVYSSSGPYRPLIPGPNXVPRLQVMPGQMATLQGMMPQQASLPMPQPHLEDH
HHVLLTSHIVNPTQAHYLHAAFRVGMLAMETLARRIHDDRPQSKYARNPPNGEDVKWLLK
LAMKLGTSSLQQFTGTVVNAVVSPFLCMTLPLRLQLFLARNNPVAVQNHLRSGILNPLVQ
KCLQMFMQCAHQRIHHINSSEYDDFVNTICTARNVFCLTPGGMVQFQELLQSLRRNKSCR
KELWQRIMKGLAMHVTL
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatgttcgattgggacaacgatggggatcggttttcctttgatgacagcgac
cggttcgaggaggagtctatgtgttcctggttgagtgaaacagagagcttgaatcaaaac
tggcgtggatggaaacgtcaaaatgctggacaagcaagtcctccattcagcaaaactcaa
gatggtagggtgctgtccctggtggagcttgcttctcagacggtggcctgcaacatcccg
tacggggtcgtggagaagtacccccagcctatcccggaaccactgcagctgaggatcaca
tactggagcttcccggactgtgaggaggacatcagactctactcctgtcttgctaatggc
agtgctgaagagtttcagaagggagatcacctgtacaaaaccaaggctgttaagaatgca
cttcagattggattccatttgagtgccactgtttgtccaaccaacacagcgggtcagcac
aacaaggatggcttcaaggtggccatcttgtttgaccgacggcggatatctcagtgcacc
tgtacttgtaacagcaatgctttctggtgttcacatgtggtggctgtctgtctattcaga
atcaaccagcccagcaatgtgacccagagggttccagtgtcagagagtctagcccagctt
caccgcgaccagctacagaagtttgctcagtacctgattgctgaaatgcccaaggagata
ctgccgattgcgcaaggtctgttggacaagctgctgtctgaccaggagtgtgacatgaac
acccagaacggggccccagaccccactgcaggggccgaggccaatgaggagacctcctgg
tgtctggatgaaaagcagcttcatgagaacgtcaagaagactctggtcaagttctgtgtg
ccttccccagtggtgttcagtgatgtgaacttcctgacccagacgaccccaccggctgca
gctgaatggcagagcctgctgcgacccctgagaggccgggagccagagggcatgtggaac
ctgctgtccatcgccagggagatgttcaggcgctctgatcataatgccatccctctcatg
gagataatcacagacgaggtgttacagtgtgagcagatcctaatatggtggttcatgaca
aagatcaccaacaacaacagcaaccagatcagcagtcggtctagcagcaacagcagcgca
agtatcacacagcatgcagcctccagcctttgtgatgagattgtcaacctctggaagctg
gcagctctcaatccaaaactgagccctgcacaaaaggaagacatgtgctcaaaattcaaa
gagtggcatgtgtccactattgagaaagtgaaacgagcgcgaaactctaattctggtagc
gccagtggaactttgaagaaaacagaaatcgagaatttttcagggtttaaaccaggtatt
gaagcctgtatcctacagtgggatgattatcatataccaggtgtgacatattcagattca
cataaattatcattgccatatagatttaataaaatgttagattcagatgccaaaaagcca
tctcgtgtacaacccatggctgtttgttcagagaacttgatcagtacagatgacaggacc
acactggcagaggccactaacatgctgaacgaacaccactcaccacaggatataaagaac
aaaaggcacagacacccaagtcgacaaggtcacaataacgacggggcaatgagctcaggg
tcagaaggcttctgtgaacctgataggggtagctcactgttcagggattctgattctggt
tcagaaatgaaagaaccaggatctaggagtaattctttagacgatgcagaaattttgttc
agtattaacactcagaaatcaaaacaagagaatttgaacttgacgacgggcaattcactt
gataatgatgaggattgtttgatggagctggggcatggggttgcccagggatctgcagca
gaagcaggcaacggggctgaagaccaaggggctggagagaggcaagcccaagtggatcca
gcaggggaacccctgggtgatgagtactccatgtacttctatgacagaaataaggcttct
gagatggacaagaaaaaggacaagaatgaggagccaaatgtctttgcaggtgtcaagtgc
ttggataataggcaggaaatttcgtttgcccgtgcagaggcccttcatgcccatggccac
actaaggaggcgtgtcagctggcccaacagctggcagaggagttgctggcctttccccca
gacctcctggcagagaccgccgctgtcccctctgtcaaagtgaagcgtaagaaggcacta
accaacatcacaatgttggccagtacaaccttgtccaaggcagccttcctagcaggggtt
ctacttgaagagcaagagatgtggcatctggccttcaagatgggcatgtttgtgttggaa
atgccacgaccacccgcctcctgtaaagccatggaggtgaagttggcctaccaggagaca
gagctgctgacccttctcaagaagatcccactgggtcctgcagagatggccgtgctgcga
cagagggctgagcaactgaaggacggcaccattaagtctcgcggagaggccctgctgcct
ctcaccctagccagcttcatatttgatgctctctgtcttggaacatgcccaatgacactg
gcaaatgttggatgtccacgtcagccggtacaggtcacatgcagacaggctggtgatgaa
aaactaggctttgaaggatgtgttgcagctctaggcatgaaggccaatgtgtcagaggca
gaccaccccttgctgtgtgagagcaccaggaaacagagaggggagcttgccatggctatg
ttgcttaactacaaagatgatatttgtaaactcagcaagattatggacaagcttcttgac
aaggaggtgcattcacagtacaaagcccacagcctggtgtcctacctaaacccaagacag
gcagccagtcagcctcaggctagtgccgcccagcagttgagcagacaccacagccacgac
ccccagagagggccccgcggggcacaggggcggggtgggaacaccaggtcctcagagctg
gatgagttccctcccactgacgacccccgggccgggcactctggcccttcctccctgggg
tctggagcccctggtgccaggcccaaaatataccccacactcacttatggccaaagtcgg
gacactgacagttcagccgtggaagaagagggagataactcctataaagcattggaagcc
aagctcaaatgcatggcactcaagaaaaagccttctcaaggcagggcagcaatagacagc
agtgcaccggagacgaccagcagtgacaattccccgaccctggtgcggcgagtgtggggc
aagccccaggggccaggcagtgacagtgggtccagcggggatagcgactccctgggctcc
agcagctcaggagacaaggcagagttgagagccaagctgagagatgagagcccacaggct
cagataaacagcaggatagcagcaacttcacagttcattttggactcaaggagctctact
ccaaatcttaaaggaatcaggttcaaaggcaagaggatcatgccgaccattcccaaccag
cccagcgaggcctcagcccactggatgtgggagctagctaagaccattctgaacaaggct
gggggttccagctccacctcacagtttatccagcccaccaacaacaccctgccaacagga
ccacacagaaacctgcagctgtgctcgtttcagatcggtctttactcactgggtctgcag
aactgtgtcgctccaaactggctctccagaacctactcctcgcatgtctcttggatttct
ggtcaggcaatggagattggcagtgctgctatacacatcttgatcgacacctgggagggt
cacctgactgccccagaagttgcctctctggctgacagggcgtctcgaggcagggatcac
aacatagtgaaggcagccgcagagctggcactgtcctgtctaccccaggctcaggccctt
aacccctctgaggtgcagagagcactctatcagtgcaaagaacagagcaaggaaatgctg
gaaaaggcttgtttggctgtcgagagtgcagccaaaggatacagtgtatacccagaagtt
ttattccatgttgccaaacgctggtacgagcttgcagaggaagctgccagacagtcgggt
ggggagaatcatggcaggcattcagttgagagccgaaatacagccgtccccactcagccc
ccgtccatggcgcgatctgcctccagtccaggtcatatagacaataccagcccagtcaat
ccctcagttgttcccttcagtaacactccgcccatgggtaaccaggtggccatgtctggt
gcccagctgatcgcccatggcaaccagcttccacccacagtcatggttccattcaccatt
ccgccagtacagtcaggtccccatcatcctcatatgcagcaacagcaaacctttgtacag
cccacctacaacattgttcaacagatccatcaaccattcgggtgtgccgccgttctcaca
aacaattccaatgcatccacagtcgatgcctccatagttaccttcacctataacaatgct
gttcattacaacctcccaccaacgacagtctactcttcctccggcccgtatcgacctctg
atccccgggcccaacnccgtcccaaggttgcaggtgatgccaggccagatggctactctg
cagggtatgatgccccaacaggcgtcattgccgatgccccagccacaccttgaggaccac
caccatgtcctgctgaccagccacattgtaaatcctacccaggctcactacctgcatgct
gctttcagagtgggcatgttggctatggagacacttgcgagacggatacacgatgatcga
ccgcagtccaagtacgctcgtaatccaccaaatggagaagacgtgaagtggctgctgaaa
ttggcaatgaagctaggcaccagttccctacagcaattcactgggacagttgtcaatgca
gtggtcagcccattcctgtgtatgacattgccattgaggctgcaactgtttctggcaagg
aacaacccagtggctgttcagaatcaccttagatccggaatactcaacccactagtgcag
aaatgtcttcaaatgttcatgcagtgcgcccatcagcgtattcaccatatcaattcatca
gagtacgatgacttcgtgaataccatatgcactgcacgcaacgtgttctgcctcacccct
ggaggcatggtacagttccaggaactccttcagagtctgcgacgtaacaagtcctgcagg
aaggaactctggcagaggattatgaagggtctggcaatgcacgtgactttatga
DBGET
integrated database retrieval system
