Dreissena polymorpha (zebra mussel): 127870608
Help
Entry
127870608 CDS
T08834
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03022
Basal transcription factors
dpol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127870608
09124 Replication and repair
03420 Nucleotide excision repair
127870608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpol03021
]
127870608
03400 DNA repair and recombination proteins [BR:
dpol03400
]
127870608
Transcription machinery [BR:
dpol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127870608
DNA repair and recombination proteins [BR:
dpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127870608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Vir_act_alpha_C
Voldacs
Motif
Other DBs
NCBI-GeneID:
127870608
NCBI-ProteinID:
XP_052269069
LinkDB
All DBs
Position
1:complement(9439802..9463357)
Genome browser
AA seq
555 aa
AA seq
DB search
MSRQSEEVLLIVENVKNKKVDGVLYVMGERIAWMQSSKKSFSYSHAYADIKSQKISPDTK
EKVQLQLVMHDGSANTFQFNNPRGRASQVEDRDQVKELLQQHLPRFRRKLSSELEEKNRL
LQENPELFQLYKDLVVSQVITAEEFWSTQAPKYAAKEKQDKNQTTGVSAAFLADIKPETD
GCNGLKYNLTADIIESIFRTYPIVRKKHTEYVPHEMTESDFWTRFFQSHYFHRDRMAQSS
KDLFSDCAKEDEEEIKSEVEKKNTDPLLDLVSHKDGILDHGYGGGTIDDKRGSVSHTNLT
MIRRFNHHSTMVLKACERAGSQTAKATQSEADSAVSNGGVGVNGEVAHTNGQEPPQKKAR
IREKNHYDDLDLIETRKSTNLRLSRMERYLHGPTPVTSMRYTSSEDLISATNNVSAEIDS
WNPDLSRVLPGSTAISVLGELSPGGALMRGTTQQQLSQMVPENMQQELKQNYNALCELLR
HFWACFPVSSQLLEDKVVKMKSTLERFHMAKLNPLKDKLQESHYSMDLTAHMQDLILSAY
AKFETWQSRKMGRKT
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacaatcagaagaagttctgttaattgtggagaatgtgaagaacaagaaggtt
gatggcgtgctctacgtaatgggagagagaattgcatggatgcagtcaagcaaaaagagt
ttctcatacagccatgcatatgcagatatcaaatctcaaaagatctcccctgacacaaag
gagaaggttcagctacagttggtgatgcacgatggcagcgcaaacacattccagttcaac
aacccacggggccgggcctcacaggtggaggaccgagaccaggtcaaggaattgctacag
caacacctgccaaggttcaggcgtaaactgagcagcgagttggaggaaaaaaacaggctc
cttcaggaaaatcctgagcttttccaactgtacaaggatctggttgtcagtcaagtcatt
acagctgaagagttttggtccactcaagcacccaaatatgcagcgaaggaaaagcaggat
aaaaatcagacaacgggagtttctgcagcctttctggcagacatcaaaccggagaccgac
ggctgcaatggcctcaagtacaatctgactgctgatataattgaatccatctttagaaca
tatcctatagtgagaaagaagcacacagagtacgttccccatgagatgacagagagtgac
ttctggacacgcttcttccagtcacactatttccaccgtgaccgcatggcccagtcgagc
aaagacttgttctcggactgtgccaaagaggacgaagaagagataaaatctgaagtggag
aagaagaacacagaccctttgttggatcttgtgtcacacaaagacggcattttggaccat
gggtatggcggaggaacgattgacgacaagcgtggctctgtcagtcacacaaatctaact
atgatccgcaggttcaatcaccactccacaatggtcctcaaagcctgtgagagggcaggg
agtcagactgcaaaggccacccagagtgaggcagattctgctgtatctaatggtggtgtt
ggagtgaatggggaagtagctcacacaaatggtcaggaaccaccacagaaaaaggcacga
atacgagaaaaaaatcactacgacgaccttgaccttattgagacccgaaagtctacaaac
ctgaggttgtctcggatggaacgatatcttcatggtccaacccctgtcacgtctatgcgg
tacacctcaagtgaagatttgatatcagccacaaacaatgtgtccgctgaaattgactca
tggaatccagatctgtctcgggtgttacctggttccacggcgatatcagttctgggggaa
ctctccccagggggcgctctcatgaggggaaccactcaacaacagctcagccaaatggtg
cctgaaaatatgcaacaggaattgaaacagaattacaatgccttatgtgaactattacgt
cacttctgggcttgttttcctgtatcttcacaacttttagaagataaggttgtgaaaatg
aagtcaactctagaacgattccacatggccaaattgaacccattgaaagacaaacttcag
gaaagtcactacagtatggatctgacagctcatatgcaagaccttattctctcagcatat
gcaaagtttgaaacatggcagtccagaaaaatgggccgaaagacttga
DBGET
integrated database retrieval system
