Dreissena polymorpha (zebra mussel): 127871826
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Entry
127871826 CDS
T08834
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol04140
Autophagy - animal
dpol04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127871826
04148 Efferocytosis
127871826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpol04131
]
127871826
Membrane trafficking [BR:
dpol04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
127871826
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
Beta-prop_DCAF12
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
127871826
NCBI-ProteinID:
XP_052271011
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Position
3:146055403..146119058
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AA seq
882 aa
AA seq
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MHDAYEPGTILEKLPLKIESITCYDDILLVGTKDGPLLKYNIKRTRASGELKYDVSLEKS
YKSFSKKAVQQLCAVPDCFILISLSDNVVSVHDLNNISHISTLAKTKGASLFATDLQTHV
SQSGEKQPTLQMCVANKRKIHVMFWKNQEFVELMSDLIVYDVPRAMVWCKDRICVGFRRD
YFILRVGSGDPKELFPLGSRQTDPVIARYEDQGFVLGRDDMSIIVDINGLPTQKYGVKWT
DIPISMVHENPYVISILPKMIEVRTVEPNLLIQSISLQNATCICQGQGQLYVASSNHVWR
LNPVSVSSQIRQLVSNKEFELALKLANMTEEPLEDKKIRIDHIKQLFAVNLFCKLQFEES
MKIFVELDTDPSHVIGLYPNLLPPEFRKKLEYPEPLPKLEGGDLEKGLLALTDYLNDKKR
KLNKKQFVMTTAIKEGNDTISSKEQLAQIIDTTLLKCYLQTNDALVASLLRLPDNNVHVE
EAERSLKKKEKYSELIILYEKKELHEKALSTLMKQATRPNSLLQGCDRTVQYLQRLGPDH
LKLIFEYAKWVIEKYPEEGLKIFTEDLSEVENLPRSQVLGYLEGLNKGSKDLAIMYLDHV
ITNWHDTNEDLHSRYAQLLRDRVQASMEEYLRGLPEGHIPALAGKEPGRLGEYRSKLIHF
LDNSMYYKPEELLPRYPMNRFYEERAILLGRLGRHEVALGLYIVVLNDHALAEKYCQKYY
KKDTPANKDVYYYLLKVYLQPPDPSSLGLTAFKEGQRPRPDKDQALRIMEEHAGCIDTTK
ALELLPPDTKIESILTFMEKVLELKAATKHSASVLRNMLYSESLHVHEQRMFYEKEKVVI
TDLKNCTVCKKRIGNSFFARYPNGVIVHYGCCKEPKVPPGDT
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcgtatgagccagggaccattttggaaaagcttccattaaaaatagaatct
atcacttgttatgatgatattttgctggtggggacaaaggatggaccgcttttaaaatac
aacataaagcgaacaagggcttcaggggagttgaagtatgacgtgtccttggagaagtcc
tacaaatcattctcaaagaaagcagtacaacagttgtgtgcagtgccagattgttttatt
ctcatcagcttatcagataacgtcgttagtgttcatgatcttaacaacatctctcatatt
tcaacattagcaaaaacaaaaggtgcatcattgtttgcaacagacctccagactcatgta
tctcaaagcggagagaagcagcctaccctgcagatgtgtgtggcaaacaagcgcaagatc
catgtcatgttctggaaaaatcaggaatttgtcgagcttatgtctgacctgatagtgtat
gatgtcccgcgagccatggtgtggtgcaaggaccgaatatgtgtgggatttagacgtgac
tacttcatactgcgggtaggttcaggtgatcccaaggagctgttcccattagggagcaga
cagactgatcctgtgatagccaggtatgaagatcagggctttgtgctggggcgagatgac
atgtccatcattgtagacatcaatggcttgcccactcagaagtatggtgtaaaatggaca
gacattcctatatccatggtgcatgagaacccatatgtgatatcgatcctgcctaagatg
atcgaagtgcgcacagtggagcctaacctgctgatccagagcatcagtctacagaacgcc
acgtgcatatgtcagggtcaaggccagctgtacgtggcctccagcaaccacgtgtggcgc
ctcaaccctgtctccgtgagcagccagataagacagctagtcagtaacaaggagtttgaa
ctggcgctcaagttagctaacatgacagaggaacccttggaggacaaaaagatcaggatc
gaccatatcaagcagctatttgctgtcaacctgttctgtaaactccagtttgaagagtcc
atgaaaatatttgtggagcttgatacagacccgtctcatgtgataggcctttatccaaac
ctgctgcctccagagttccgcaagaagctggagtatcctgagcccctgcccaaactggaa
ggtggtgaccttgagaagggactactggcccttactgactacctcaatgataaaaagcgt
aagctgaataagaaacagtttgttatgacgacggctatcaaagagggcaatgacaccata
agtagcaaggagcagctggctcagatcatagacaccaccctgctcaagtgctacctgcag
actaatgatgcgctggtggcctcattgttacgtcttccagacaacaatgtccacgttgag
gaggcagagagatctctgaagaagaaggagaagtatagcgagctaattatcctttatgag
aaaaaggagctccatgagaaagctctgagtaccctgatgaagcaggcaacccgccccaac
tccttactgcaaggctgtgatagaactgtgcaatacctacaacgccttggtccggaccat
ttgaaactgatatttgaatatgcaaaatgggtgattgagaaatatccagaggaggggctt
aagatatttacggaggatctctcggaggtggaaaatttaccaaggtctcaagtgctaggc
tatctggagggtctaaacaagggcagcaaggaccttgcaatcatgtatctggaccatgtg
atcacgaattggcacgatacgaatgaggacctgcacagccgctatgcccagctactgagg
gatagggtgcaagcctccatggaggagtatctgaggggtttaccagagggtcatatcccg
gcactggcgggcaaggagcctgggaggctgggagagtaccgcagcaagctgatacacttt
ttggacaactccatgtactacaagccagaggagctgcttcccagataccccatgaacaga
ttctatgaggagcgggccatactgctgggcaggcttgggcgacatgaggtggcactgggg
ctgtatatcgtggtactcaatgatcacgcacttgcagaaaaatactgccaaaaatactac
aagaaagacacacctgcaaataaggatgtgtactactacctcttgaaggtctacctgcag
cccccggacccatccagtctggggctgacagccttcaaggagggacagcggccccggccg
gacaaggaccaggcccttaggatcatggaggagcatgcagggtgtatagacaccacaaag
gctctagagttgttgccccctgatacaaagatagaaagcatactgacattcatggagaag
gttctggaactgaaagcggcaactaaacacagcgccagtgtgctgcgtaatatgctctac
tctgagagcttgcatgtgcatgagcagaggatgttctatgagaaagagaaagttgtcatc
acggatctcaagaattgcactgtgtgcaagaaacgcataggaaacagtttctttgctcgc
tatcccaatggtgtgattgtgcactacggctgctgcaaggagcccaaagttccccctgga
gacacctga
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