Dreissena polymorpha (zebra mussel): 127871969
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Entry
127871969 CDS
T08834
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03030
DNA replication
dpol03410
Base excision repair
dpol03420
Nucleotide excision repair
dpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127871969
03410 Base excision repair
127871969
03420 Nucleotide excision repair
127871969
03430 Mismatch repair
127871969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpol03032
]
127871969
03400 DNA repair and recombination proteins [BR:
dpol03400
]
127871969
DNA replication proteins [BR:
dpol03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127871969
DNA repair and recombination proteins [BR:
dpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127871969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
RuvB_N
AAA_33
AAA_14
AAA_5
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
127871969
NCBI-ProteinID:
XP_052271230
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All DBs
Position
3:complement(151316301..151429627)
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AA seq
1211 aa
AA seq
DB search
MATDIRKFFGKTPVKNDKPSEKSKPELTKIKNGKDRPEQKYVDLTETMDVDDFQDENGNR
KQSKKKQDSKDKIKQEKRKSLEKDQTKDNMHNKEKEKHKDNDKKSKKSEKGTKKQLDSST
SEKDEIDGEAVTKKSKAKKRKLEISSDEEVINVENNQDDEDDDEVIVKKSQLKKKGKKKP
KLFDSDEDEDPIPKEKKARKSRKIVHVGGSDGYTEEEIPEPKPKTTFMDKFLASKSPSKD
TGSSKALKPEPAKNLGTAKKPEEVKPTVLASAFFGDTSIHRVERKVIPAKKPVGETIVDL
ELHSDDEFERTLELIDEEELTGLKKIDSKGTSDKLSLSSKLASKARDQSVQSPEKKPLIL
APDTPVSKQPSPKKAKMEFIMNRHERKTEAPATKKTPEKKVSPAKQGSENKTSPGKQESD
GFTPKGGGAGYRAYLNRAGPQSLGAKEIPEGAENCLEGLTFVITGVLDSFERDEAKVAVE
RYGGKVTGNVSKKTDYLVAGRDPGQSKITKAEAFRTKILDEDGLLDLIRTRPGKKSKYTL
QAEASVKKEMAETKSSTTEKLSSFKKEQQTPSKSLSFNTKDTQSVSNKTSHSIISNKIQS
DSSILNSDQSETSSKPNTEPSEPSLLWVDKYKPTSLKQIIGQTGDKSNAKKLLQWLTNWH
KDQASGIKPVSTGKFFGGKGGSETGAGFKAALLSGPPGIGKTTTATLVCQEAGFSFVELN
ASDTRNAKSLKEVISQSVGNTSIVDFMGSGVSSTHGHKHCLVMDEVDGMSGNEDRGGVQE
LVNIIKATKIPIITMCNDRNHQKMRTLANYCFDLRFQRPRVEQIKAAVMSIAFKEGLNVP
PPAVNEIIVAANQDIRQVIHNLSMWTADSKAITYDQVKSDAQHAKKDFKLGPFDVCRKVF
VGGEETNKMTLNDKSDLFFHDYNIAPLFVQENYIHVIPYAAKGNNHRHLSLLARTADSIS
CGDMVERRIRTLQSWSLLSLEAMYGSVIPGEYMRGNITQMIAFPGWLGKNSTTGKNERIL
QELRTHMRLKVSGDKRSLNMDYLPFMRHSLTEPLVKREEDGVKEVIHLMDEYDIIKDDFD
NILEITKWPNSKDPLSLLSTKTKAAFTRTYNKEVHMTPYSTGTVTKKKGRGAGGTDLDPD
LLGEGSEVMEGVGSEEEEEHGEDDLETDTMIKKKTASKAKAEPKGKGKAPAKGKSEPKGK
SEPKGKGKGKR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccacggacatccgaaagtttttcggcaaaacgcctgtcaaaaacgataaaccttca
gaaaaaagtaaaccagagctgacaaaaattaaaaatggcaaagatagacctgaacaaaaa
tacgtggaccttacagagacaatggatgttgatgattttcaagatgaaaacgggaatcga
aaacaaagtaagaaaaagcaggattcaaaagacaagattaaacaagaaaagagaaaatct
ttagaaaaagatcaaactaaagataatatgcacaacaaggagaaagaaaaacacaaagat
aatgacaagaaaagcaaaaagagtgaaaagggcacaaaaaagcagctggattcaagtaca
tcagaaaaggatgaaattgatggtgaagcagttacaaaaaaaagtaaagcaaagaaacgt
aaattggagatatccagtgatgaagaagttatcaatgttgaaaacaaccaagatgatgag
gacgatgatgaggtcatagttaagaaatcacagctgaagaaaaaaggaaagaagaaacct
aaactgtttgattcagacgaggatgaagatccgatcccaaaggagaagaaggcaaggaaa
tccaggaaaattgtccacgtcggaggttcagatgggtacacagaggaagaaattccagag
ccaaaaccaaagacaacatttatggataagttcttggccagtaagagccccagtaaagac
actggctcatcaaaagcattgaaaccagagcctgccaaaaaccttgggactgcaaagaaa
ccagaagaagttaaacccactgtcttagcttcagctttttttggagacactagcattcat
cgggtggaaagaaaagtgatcccagctaagaagcctgtaggggagaccattgttgaccta
gagctgcacagcgatgatgagtttgaacgcaccctggagcttatagatgaagaagaactc
actggattgaagaaaattgacagtaaaggaacttcagataagctcagcctctccagtaag
ctggccagcaaggcgagggatcaatctgtccagtctccagagaagaaacccctcatactg
gcgcctgatacaccagtctccaaacagccttctccaaagaaagccaagatggagtttatt
atgaacagacacgagaggaaaacagaagcgcccgctacaaagaaaacgccagagaagaag
gtttcccctgctaagcaaggctcagagaacaagacaagtccagggaaacaagagtcggac
ggcttcactccaaagggaggtggggctggctaccgggcatacctcaacagggccgggcca
cagtcactaggggccaaggaaataccagagggagctgagaattgcctggagggtctcaca
tttgtgatcacgggagtcctggactcatttgagcgtgacgaggcaaaggtcgcggtagaa
cggtatgggggaaaggtcaccggcaatgttagcaagaaaacagactaccttgtagctggc
agggatcctgggcagagcaagattaccaaggctgaagcctttagaaccaagattctggat
gaagatggcctacttgatttgatacgtacaagacctgggaagaaatccaagtacacctta
caggcagaggcatcagtgaaaaaggaaatggcagaaactaaatcttctacaacagaaaag
ttgtcttcatttaaaaaggaacagcaaacaccttccaagtctctctcattcaatactaaa
gacacccagtcagtttcaaacaaaacatcgcattctatcatttcaaataaaatacaatca
gattccagtattttaaattctgaccaatcggaaactagtagcaaaccaaatactgaacct
tcagagccatcattactttgggtcgacaaatacaaaccaaccagtctaaagcaaataatt
ggccagactggagacaaaagcaatgcaaagaagctccttcaatggttgacaaactggcac
aaagatcaagcctctgggattaaaccggtttcaactggaaagttttttggtgggaaaggt
gggagtgaaaccggtgcaggatttaaagctgcattgctatccggaccacctgggattgga
aaaacgacaactgctactcttgtatgccaggaggcaggtttctcgtttgtggagttgaat
gcgtcagacacacgcaatgccaagagcctgaaagaggtgatctcccagtcggtaggcaac
acaagcatcgtggacttcatgggtagtggggtgtccagcacacacgggcacaagcactgc
ctggtgatggatgaggtggacggtatgtccgggaatgaggacaggggaggggttcaggaa
ttggtgaacattatcaaggcaacgaagattccaatcatcaccatgtgtaacgaccgcaac
caccagaagatgaggacgctggcaaactactgctttgacctgcgcttccagagacccaga
gtggaacaaatcaaggcagcagtgatgtccatagcgttcaaggagggtttaaatgtgcca
ccaccagctgtcaatgagatcatagtggcagccaaccaggatatcagacaggtgattcac
aatctgtccatgtggactgcagatagcaaagccatcacgtacgaccaggtgaagtcagac
gcccagcacgctaagaaggacttcaagctaggtccttttgacgtgtgtcggaaagtgttt
gtgggtggggaagagaccaacaagatgactctcaacgataagtcggacctgttcttccac
gattacaacattgcgccactgtttgtgcaggagaactacatacatgtgataccgtacgct
gcaaagggtaacaatcatcggcacctgtcactactggcccgcacagctgactcaatcagc
tgtggagacatggtagagaggagaatacgtacactgcagagctggagtcttctctccctg
gaggcgatgtacggcagtgttatccctggggagtacatgcggggtaacatcacccagatg
attgcattcccaggctggctgggtaagaactcgaccacaggcaagaatgagaggatccta
caggaactgaggactcacatgagactcaaggtgtctggtgacaagcggagtctcaacatg
gattacctgcccttcatgcgtcactccctcacggagccccttgtgaaacgcgaggaggat
ggtgtgaaggaggtgatccacctgatggacgaatacgacatcatcaaggatgacttcgat
aacatcctggagatcaccaagtggcccaacagcaaagacccgctgagtttactgagtact
aagacaaaggcagcattcacacggacgtacaacaaggaggtgcacatgaccccatactcc
acgggaacagtcaccaagaagaaggggcgtggagcgggagggactgacctggaccctgac
ctcctgggggaggggtcagaggtcatggagggggtggggtcagaggaggaggaggagcat
ggggaggacgacctggaaactgacaccatgataaagaaaaagacagcttcaaaggcaaaa
gcagagcccaaaggcaaagggaaagctcctgcaaaagggaaatcagaacccaagggaaaa
tcagaacccaagggcaaaggaaaggggaaaagatga
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