Dreissena polymorpha (zebra mussel): 127872691
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Entry
127872691 CDS
T08834
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03030
DNA replication
dpol03410
Base excision repair
dpol03420
Nucleotide excision repair
dpol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127872691
03410 Base excision repair
127872691
03420 Nucleotide excision repair
127872691
03430 Mismatch repair
127872691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpol03032
]
127872691
03400 DNA repair and recombination proteins [BR:
dpol03400
]
127872691
DNA replication proteins [BR:
dpol03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127872691
DNA repair and recombination proteins [BR:
dpol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127872691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
AAA
AAA_22
PTCB-BRCT
RuvB_N
AAA_33
AAA_14
AAA_5
AAA_19
AAA_16
BRCT_2
Motif
Other DBs
NCBI-GeneID:
127872691
NCBI-ProteinID:
XP_052271982
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All DBs
Position
3:151726996..151772315
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AA seq
912 aa
AA seq
DB search
MATDIRKFFGKTPVKNDKPSEKSKPELTKIKNGKDRPEQKYVDLTEAMDVDDFQDENGNR
KQSKKKQDSKDKIKQEKRKSLEKDQTKDNMHNKEKEKHKDNDKKSKKSEKGTKKQLDSST
SEKDEIDGEAVTKKSKAKKRKLEISSDEEVINVENNQDDEDDDEVIVKKSQLKKKGKKKP
KLFDSDEDEDPIPKEKKARKSRKIVHVGGSDGYTEEEIPEPKPKTTFMDKFLASKSPSKD
TGSSKALKPEPAKNLGTAKKPEEVKPTVSASAFFGDTSIHRVERKVMPAKKPVGETIVDL
ELHSDDEFERTLELIDEEELTGLKKIDSKGTSDKLSLSSKLASKARDQSVQSPEKKPLIL
APDTPVSKQPSPKKAKMEFIMNRHERKTEAPATKKTPEKKVSPAKQGSENKTSPGKQESD
GFTPKGGGAGYRAYLNRAGPQSLGAKEIPEGAENCLEGLTFVITGVLDSFERDEAKVAVE
RYGGKVTGNVSKKTDYLVAGRDPGQSKITKAEAFRTKILDEDGLLDLIRTRPGKKSKYTL
QAEASVKKEMAETKSSTTEKLSSFKKEQQTPSKSLSFNTKDTQSVSNKTSHSIISNKIQS
DSSILNSDQSETSSKPNTEPSEPSLLWVDKYKPTSLKQIIGQTGDKSNAKKLLQWLTNWH
KDQASGIKPVSTGKFFGGKGGSETGAGFKAALLSGPPGIGKTTTATLVCQEAGFSFVELN
ASDTRNAKSLKEVISQSVGNTSIVDFMGSGVSSTHGHKHCLVMDEVDGMSGNEDRGGVQE
LVNIIKATKIPIITMCNDRNHQKMRTLANYCFDLRFQRPRVEQIKAAVMSIAFKEGFKVA
PPAVNEIIVAAQPGYQTGNIGLNQDIRQVIMASTRISDSMQYGCPFPSMASSQGTDQGVP
WRSPLWPVGYVM
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggccacggacatccgaaagtttttcggcaaaacgcctgtcaaaaacgataaaccttca
gaaaaaagtaaaccagagctgacaaaaattaaaaatggcaaagatagacctgaacaaaaa
tacgtggaccttacagaggcaatggatgttgatgattttcaagatgaaaacgggaatcga
aaacaaagtaagaaaaagcaggattcaaaagacaagattaaacaagaaaagagaaaatct
ttagaaaaagatcaaactaaagataatatgcacaacaaggagaaagaaaaacacaaagat
aatgacaagaaaagcaaaaagagtgaaaagggcacaaaaaagcagctggattcaagtaca
tcagaaaaggatgaaattgatggtgaagcagttacaaaaaaaagtaaagcaaagaaacgt
aaattggagatatccagtgatgaagaagtgatcaatgttgaaaacaaccaagatgatgag
gacgatgatgaggtcatagttaagaaatcacagctgaagaaaaaaggaaagaagaaacct
aaactgtttgattcagacgaggatgaagatccgatcccaaaggagaagaaggcaaggaaa
tccaggaagattgtccacgtcggaggttcagatggttacacagaggaagaaattccagag
ccaaaaccaaagacaacatttatggacaagttcttggccagtaagagccccagtaaagac
actggctcatcaaaagcattgaaaccagagcctgccaagaatcttgggactgcaaagaaa
ccagaagaagttaaacccaccgtctctgcttcagctttctttggagacactagcattcat
cgggtggagagaaaagtgatgccagctaagaagcctgtaggggagaccattgttgaccta
gagctgcacagcgatgatgagtttgaacgcaccctggagcttatagatgaagaggaactc
actggattgaagaaaattgacagtaaaggaacttcagataagctcagcctctccagtaag
ttggccagcaaggcgagggatcaatctgtccagtctccagagaagaaacccctcatactg
gcccctgatacaccagtctccaaacagccttctccaaagaaagccaagatggagtttatt
atgaacagacacgagaggaaaacagaagcgcccgctacaaagaaaacgccagagaagaag
gtttcccctgctaagcaaggctcagagaacaagacaagtccagggaaacaagagtcggac
ggcttcactccaaaaggaggtggggctggctaccgggcatacctcaacagggccgggcca
cagtcactaggggccaaggaaataccagagggagctgagaattgcctggagggtctcaca
tttgtgatcacaggagtcctggactcatttgagcgtgacgaggcaaaggtcgcggtagaa
cggtacgggggaaaggtcaccggcaatgttagcaaaaaaacagactacctggtagctggc
agggatcctgggcagagcaagattaccaaggctgaagcctttagaaccaagattctggat
gaagatggcctacttgatttgatacgtacaagacctgggaagaaatccaagtacacctta
caggcagaggcatcagtgaaaaaggaaatggcagaaactaaatcttctacaacagaaaag
ttgtcttcatttaaaaaggaacagcaaacaccttccaagtctctctcattcaatactaaa
gacacccagtcagtttcaaacaaaacatcgcattctatcatttcaaataaaatacaatca
gattccagtattttaaattctgaccaatcggaaactagtagcaaaccaaatactgaacct
tcagagccatcattactttgggtcgacaaatacaaaccaaccagtctaaagcaaataatt
ggccagactggagacaaaagcaatgcaaagaagctccttcaatggttgacaaactggcac
aaagatcaagcctctgggattaaaccggtttcaactggaaagttttttggtgggaaaggt
gggagtgaaaccggtgcaggatttaaagctgcattgctatccggaccacctgggattgga
aaaacgacaactgctactcttgtatgccaggaggcaggtttctcgtttgtggagttgaat
gcgtcagacacacgcaatgccaagagcctgaaagaggtgatctcccagtcggtaggcaac
acaagcatcgtggacttcatgggtagtggggtgtccagcacacacgggcacaagcactgc
ctggtgatggatgaggtggacggtatgtccgggaatgaggacaggggaggggttcaggaa
ttggtgaacattatcaaggcaacgaagattccaatcatcaccatgtgtaacgaccgcaac
caccagaagatgaggacgctggcaaactactgctttgacctgcgcttccagagacccaga
gtggaacaaatcaaggcagcagtgatgtccatagcgttcaaggaggggtttaaagtcgca
ccaccagctgtcaatgagatcatagtggcagcccaaccaggatatcagacaggtaatata
ggcctcaaccaggatatcagacaggtaattatggcctcaaccaggatatcagacagtatg
cagtatggctgtccgttcccgtccatggcgtcctcacagggcacagaccaaggggtccca
tggcgctcgccgctgtggcccgtcggctatgtcatgtga
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