Dreissena polymorpha (zebra mussel): 127872898
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Entry
127872898 CDS
T08834
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol04120
Ubiquitin mediated proteolysis
dpol04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127872898
04120 Ubiquitin mediated proteolysis
127872898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpol04121
]
127872898
Enzymes [BR:
dpol01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127872898
Ubiquitin system [BR:
dpol04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127872898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H
zf-RING-like
zf-ANAPC11
zf-RING_11
FANCL_C
PHD_NSD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127872898
NCBI-ProteinID:
XP_052272356
LinkDB
All DBs
Position
3:103807350..103890277
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AA seq
652 aa
AA seq
DB search
MRVQEMKTIFLTSGSFFLTACVVGNAFYQKQQFYPSVVYITKSNPSLAALYLQAFVLVIL
MGKLVRKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVAAFTLLLFLKCF
HWLAEDRVDFMERSPVISFLFHVRVVSLLTFLSVIDAYFVNYAYYSTLSKGASVQLVFGF
EYAILITIVMMAVMKYLLHSIDLQSENPWENKAVYLLYSELVLGFVKVILYMMFMIIMIK
IHTFPLFAIRPMYLAVRNFKKSLHDVIMSRRAIRQMNTLYPDVSQEELESGDNVCIICRE
DMVSACKKLPCNHIFHTSCLRSWFQRQQTCPTCRMEVLQMTPLRSQPTPPPHQQQQHIQN
PFQNLFPGGFPPIPPGALPQMPQMWPPQMAQGQPPQMAQRPPPQMAQGQPPQTLPASTPG
FSHTTPTVSAAGTTPLGASASFPDVRTGWGTASHFVGATTMPAMFPPMFMPNNFPRPPTS
LDGLSDEELRAMEGVERGNIEARIQWLRDIQALLDGAMLLMQQYNIVAAASSIPGINLTA
QNPSVVLPSGVPQSYMAPPGQQTGAIPKHRNTAANFESVQSSSSQELSADSPTAEGAQGL
PTTDEFIPEWVDPREESKDIEEVRRRRLEKFESESPKSLGATSLDSDEEIPS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtccaagaaatgaagacgatttttttaacaagtggaagtttttttcttacagct
tgtgttgtgggcaatgcattttaccaaaaacaacagttttatccgtctgttgtttacata
acgaagtcaaatccaagcctggcggccctgtatctccaggcatttgtacttgtcattttg
atgggcaaacttgtcagaaagatcttttttggtcagctgagagcagcagaaatggagcat
ttgattgagaggtcttggtatgcagtgacagagacgtgcttggcatttacagtgtttcga
gacgatttcagtccacgttttgtggcagcattcactttgctgctattcttgaaatgtttc
cattggttagcagaggacagggttgattttatggagagaagtcccgtgatttccttcctg
ttccatgtcagagttgttagtttgctgacatttctttcggtgattgacgcttactttgta
aactacgcatactacagtacactgtctaaaggtgcctctgttcagttggtgtttggattt
gagtatgccattttgatcacgattgtgatgatggcagtaatgaagtacctgctacattca
attgatcttcaaagcgaaaacccatgggaaaacaaagcagtttaccttctgtactcggaa
ctagttcttggttttgtgaaggtgatactgtacatgatgttcatgatcatcatgatcaag
atacacacctttcctctgtttgccattcgacccatgtaccttgctgtgagaaattttaag
aagtcccttcatgatgttattatgtcaagacgagccatcagacaaatgaacacactctat
cctgatgtgtcacaggaagaactggaatctggggacaatgtgtgcatcatttgtcgggag
gacatggtttctgcctgtaaaaagttgccctgcaaccatatcttccacacaagctgcctt
cgatcctggttccaacgtcagcagacatgccccacgtgcaggatggaggtgctacagatg
accccactccgctcccagcccacccctccacctcaccagcagcaacaacacatacaaaac
cctttccaaaacttgttccctggtggatttcccccaatacctcctggagccttgcctcag
atgcctcaaatgtggcctccacagatggcacagggacaacccccacaaatggcccagcga
ccaccaccacagatggcacagggacaacccccacagactctacctgcaagtacaccaggc
ttctctcatacaacgccaacagtatcagcagctggcacaacccctctgggagcatcagca
tctttcccagatgtaagaactggctgggggacagcctcacattttgtaggggccaccact
atgcctgccatgtttcctccgatgtttatgccgaacaattttccgaggccccctacgagt
ctagatggcctgtctgatgaggagttacgtgctatggaaggggttgagagaggcaacatt
gaggctcgcattcagtggctcagagatatacaggctctattggatggtgccatgcttctc
atgcagcaatacaacatcgtagcagcagcttccagcatacctggtataaacctgactgca
cagaatccatctgttgtattgccaagtggagtgccccagtcatacatggccccacctggg
caacaaacaggtgccataccaaaacacagaaacactgcagctaactttgaatctgttcaa
agcagttccagtcaagaactaagtgcagactcacctactgccgaaggtgcccaaggattg
ccaactactgacgagttcataccagaatgggttgatccaagagaagaaagcaaagacatt
gaagaagtacgaagaagaagattagaaaaatttgaatccgaatcacctaaaagtttaggc
gctacatcattagacagtgatgaagaaatacccagctag
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