Dreissena polymorpha (zebra mussel): 127872907
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Entry
127872907 CDS
T08834
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03013
Nucleocytoplasmic transport
dpol03015
mRNA surveillance pathway
dpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127872907
09122 Translation
03013 Nucleocytoplasmic transport
127872907
03015 mRNA surveillance pathway
127872907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127872907
03041 Spliceosome [BR:
dpol03041
]
127872907
03009 Ribosome biogenesis [BR:
dpol03009
]
127872907
03012 Translation factors [BR:
dpol03012
]
127872907
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127872907
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127872907
mRNA cycle factors
Stress granule specific factors
127872907
Spliceosome [BR:
dpol03041
]
Complex C
Other components
EJC/TREX
127872907
Ribosome biogenesis [BR:
dpol03009
]
Eukaryotic type
90S particles
Helicases
127872907
Translation factors [BR:
dpol03012
]
Eukaryotic type
Initiation factors
eIF-4
127872907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
UvrD-helicase
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
127872907
NCBI-ProteinID:
XP_052272387
LinkDB
All DBs
Position
3:102337322..102365491
Genome browser
AA seq
398 aa
AA seq
DB search
MARRVMTDDLKTVEFETSEDVDVTPTFDSMGLREELLRGIYAYGFEKPSAIQQRSIKPIV
KGRDVIAQAQSGTGKTATFSISVLQCLDTQVRETQALILSPTRELAQQIQKVILALGDYM
NVQCHSCIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIKRRNLRTRAIKMLILDEADEML
NKGFKEQIYDVYRYLPPATQVILISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQ
FFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRDANFTVSSMHGEMKQ
PEREAIMKQFRSGASRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGR
KGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcgtgttatgactgacgatctgaaaacggtagagtttgaaacaagtgaagat
gtcgatgttacaccaacctttgatagcatgggacttcgcgaggaattattgcggggaatt
tacgcatatggttttgagaagccttcagctattcagcaaaggtccatcaaaccgattgta
aaaggccgtgatgttattgcgcaagctcagtcaggtaccggcaagacggcaacattttcc
atctctgtgctgcaatgtctggacacacaggtccgtgagacacaggcactcatcctctcc
ccgaccagagaactggcacaacagatccagaaggtcattctggctttgggtgactacatg
aatgtccagtgtcactcatgtattggaggcacaaacatcggcgaagatatccgcaaactg
gactacggtcagcatgttgtctctggaactcccggccgtgtgtttgacatgatcaaaaga
agaaacttgagaaccagagccataaagatgctgattctggatgaggccgatgaaatgctt
aataaaggattcaaggagcagatctatgatgtgtaccggtacctgcccccagccacgcag
gtgatcctgatctctgccacactgccacacgagatcctggagatgaccagcaagttcatg
acagaccccatacgcatccttgtcaaacgtgatgagttgaccctggaaggcatcaagcag
ttcttcgttgccgtggagagagaggagtggaagtttgacacgctgtgtgacctctacgac
accctcaccatcacccaggctgtcatcttctgcaacaccaagaggaaggtggactggctg
acagagaagatgcgtgacgcaaacttcacagtgtcctctatgcacggagagatgaagcag
ccggagcgagaagccatcatgaagcagttcagaagtggggccagccgtgtgctgatcacg
acagatgtgtgggcacgaggcctggatgtgcagcaagtgtctctcgttatcaactatgat
ctccccaataacagagagttgtacatccacaggattggtcgttctggaagattcggcagg
aaaggtgtggccatcaactttgtcaaaaatgacgacattcgtatcctgcgagatattgag
cagtactactctactcagattgatgaaatgcctatgaacgtggctgatctcatctag
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