Dreissena polymorpha (zebra mussel): 127875342
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Entry
127875342 CDS
T08834
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127875342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127875342
Messenger RNA biogenesis [BR:
dpol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127875342
U7-dependent histone pre-mRNA processing factors
127875342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
127875342
NCBI-ProteinID:
XP_052276299
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Position
3:93886454..94115950
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AA seq
754 aa
AA seq
DB search
MTSIIRLQPLSGAQDESPPCYLLQVDEYRFLLDCGWDEDFSMGIIKEIKRHLHKIDAVLL
TYPDHLHLGALPYLVGKCGLTCPVYATVPVYKMGQMFMYDLFQSRNNSEDFIMFTLDDVD
VAFDKIIQLKYSQTISLSGKGHGLQITPLPAGHMIGGTIWKILKDGEEEIVYAIDYNHKK
ERHLNGCILEAKYFSRPHLMITDAFNANYNQSRRRMRDEQLMTTILQTMRRDGNVMIAVD
TAGRMLELAQLLDQMWRSTESGLTTYSLALLNNVSFNVVEFAKSQVEWMSDKIMRAFEDH
RSNPYHFKHLKLCHNLSELGRIPEPKVVLCSQPDLQSGFSRDLFVAWCGNPKNSIILTNR
TSPRSLARWLIDHPDNKTVTMEVRRRIRLEGQELEEYMRRKQEAKTEEKKSLKQEESSDE
SDVEMEVDGAAPVPSSSKAKHDIIIKQEGKGRSSFFKQAKKSYPMFPYVEERMKWDEYGE
VIRPEDYIIGETATTEENISTEKLVAEFDQLQDVSEVPTKCIAVTVTLDINASIQYIDFE
GRTDGESMRKILSQIKPRQLVLIHGTEEATDSLADYCRSTAGLVQGSVFTPSIGEVIDAT
TESHIYQVKLKDYLVSALEFAKARDAELAWIDGCIKFTDVDADINVQTDDMDDEIKPSVV
RGQAGLEKVPCLEALPQTQVPGHMAVYINEPKLSDFKMVLLQEGIQAEFSAGALVCNDTI
AVRRNEAGRMQLEGAISKDYFKVRDLLYKQYAIV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatacgactccaaccgctctctggggcacaggatgagagccccccgtgt
tacctgctgcaggtggatgagtaccgattcctgcttgactgtggctgggatgaggacttc
agtatgggcattatcaaggagattaaaaggcacttgcacaagatagatgctgtgttgctg
acctatccggaccacctgcatctcggtgctctaccgtacctggtcggcaagtgtggcctc
acctgtcctgtgtatgccactgttcccgtctacaagatgggacagatgttcatgtatgac
ctctttcagtcaaggaacaactctgaggactttataatgttcaccctggatgatgtggac
gttgccttcgacaagataattcagttgaagtactcacagaccatcagcctatcaggcaag
ggccatggtctgcagattacgcccctgccggcaggtcatatgattggtggaactatctgg
aagattctcaaggatggcgaggaggagattgtttatgccatagactataatcacaagaag
gagagacatctcaatggctgcattctggaagcaaagtacttttctcgtcctcatctgatg
atcacagatgccttcaatgccaactacaaccagtccagacgtcgcatgagggacgaacaa
ctcatgacaaccatcttgcagaccatgagacgtgatgggaacgtgatgatagctgtggac
accgcaggtcgaatgcttgagcttgcacagttactggatcagatgtggagaagtacagag
tctgggttgacaacctactccctggctcttctgaacaatgtcagcttcaacgttgtagag
tttgccaagtcacaggtggaatggatgagtgacaagataatgcgagcctttgaagatcac
cgtagcaacccataccacttcaagcacctgaagctgtgccacaatctgtcagagcttgga
agaattccagaaccaaaggtggtgctatgtagccaaccggacctgcagagcggcttttcc
agagacttgtttgtagcctggtgcgggaatccaaaaaacagcatcatactgaccaatcga
acgtcaccgcgatccctggcaagatggctcatagaccatcctgacaacaaaactgtcacc
atggaggttcggcgcaggatccgactggaaggccaagagttagaggagtacatgaggagg
aagcaggaggccaagacagaggagaagaagtctctaaagcaggaggagtcgagtgacgag
agtgatgtagagatggaggttgatggggcagcaccagtccccagctcatccaaggccaaa
catgacatcatcattaaacaggagggtaaaggtcgttcgagcttcttcaagcaggctaag
aagtcatacccaatgtttccatatgttgaggagaggatgaaatgggatgagtacggagag
gtcatacggccagaagattacataatcggggagacggccaccacagaggaaaatatatca
acggagaagttagttgcagaatttgaccaacttcaagatgtgtcagaggtcccaacaaaa
tgcatcgcagtgactgtgactctggacatcaatgccagcattcagtacatcgacttcgag
ggacggacggacggagagtccatgaggaagatacttagccagataaagcctcgacagctg
gtactgattcatgggacagaggaggctacggactcactggcagactactgtcgctccacg
gcgggccttgtacagggttctgtattcacaccaagcatcggtgaggtcatcgacgctacc
actgagtctcacatctatcaggtgaagctcaaggattacttggtctcggcgcttgagttt
gccaaggcgcgcgacgctgagctggcgtggattgacggctgtatcaaattcactgatgtg
gacgctgacatcaatgtgcaaacagatgacatggacgatgagatcaaaccttcagtggtg
agagggcaggcaggtttggagaaagtgccatgcctagaagcactgccccaaactcaggtt
cctggtcacatggctgtgtacatcaatgagcccaaactcagcgacttcaagatggtccta
ctgcaggaggggatacaggcggagttcagtgcaggcgcacttgtgtgcaacgataccatc
gcagtaagaaggaatgaggctggacgtatgcagctagagggcgcaatttcaaaagactat
ttcaaagttcgagatctgttgtataagcagtatgccatcgtgtga
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