Dreissena polymorpha (zebra mussel): 127877611
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Entry
127877611 CDS
T08834
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpol03041
]
127877611
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127877611
Spliceosome [BR:
dpol03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127877611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Helicase_C
HA2_C
OB_NTP_bind
R3H
DEAD
HA2_N
Ank_2
AAA_19
AAA_22
nSTAND3
NPHP3_N
T2SSE
ATPase
Ank_4
Motif
Other DBs
NCBI-GeneID:
127877611
NCBI-ProteinID:
XP_052279610
LinkDB
All DBs
Position
4:complement(83496035..83580526)
Genome browser
AA seq
1502 aa
AA seq
DB search
MPGKPNQRPSSAGGRSSGQGSRGGRMPDWGLRPTQGPKLHEDACISEEVKIGINLAIERF
RMNEQQKELEFPSSLTATERAYIHRRAEELGLKHKSRGQNASRHLVLAKKEGTKADIRSA
VLQLVRSSKFQIANLLQRFPLTSKEKLELLPNMDKAMVNEVSKELARTATGRLNNGLPQV
PPGRGSSELSSFTQALPVNRYRDTILDTIRNSQVCMVSGETGSGKTTQVPQMILDDCHRT
GTQCRIFCTQPRRIAALSVSERVAAERGESIGQTVGFQIRLESRVSPKTLLTFCTNGVLL
RTLMGGESTMDTVTHVIVDEVHERDKFCDFLLITLRDIAQRNSRLKIILMSATLNIDLFV
KYFYNCPVVSVPGNLFPVEEHFLEEVLTWTGYTNKKMQKYRAEMSKKAEKEARLSDWVDP
RVDVRRERLRQKYGSQEEEEGEQADKVSDNRNSVLKQLAQLGSCHVEKGEEELEPWVRAE
MDRCMTEIWLTGDAELFSQLFYFISSENVSVDYQHSETSVTALMIAGGRGFPAVVDQLLS
LEADPDIKSSNGWTALDWARKFNQEEVIALLEANMLVSKTDRGNQGDPLEEEEEGQGMSE
EQKELLTTYQHCWNDDKVDMDLIVALLRMIVTTKPEGAVLIFLPGYDEIVSLRSRIEDDD
SIANVRYSLYCLHSAMQTSDQRKVFRPAEHGVRKIILATNIAETSITINDVVYVINSGKV
KEKTFDSLLQVTMLKSNWISKASTAQRKGRAGRCRPGVCYHMFSRVRYSHMCDYPTAEIL
RCPLQELCLQTKLLAPANENIEDFLSRAPEPPPYLVTRAALNILKLMDALDGGQELTELG
RHLADLPVEPHLGKMVLHSIVLKCLDPILTIVCAISYKDPFLLPAWASEKMAVKGIRKDF
SANTFSDHMALLRVFQAWQKARTDGWERSFCDKNYVSPAVMEMIVGMRAQLLGQLRASGF
VRARGGGDIRDLNTNSENWAVVKAALCAGAYPNIVRWDQQAKKLIGQSSGKIGVHKSSVL
PTEPRSLPSDWLLYEEMTQAGQGSSYTSLACIRCCTLVSPITVALFAGPAKLPADAVKDN
LSDLEGCGPGESSDSENEDPDDNKTYLLQLSDWLAFRVDPESVGLGVQLRQKWQGLFLRR
MRAPSKPMAPGDEAIISTLVTVLINEEQALGLQQPAGIGQRPKPMSAESIMSGGGRGQGS
VHEVQGDMSRHRFSTSAKKATSTPPKRKDFMSPKLSQSSSGSAVASPVSSVGTPSSSPQG
VPAGAGRFFVMKCSSPRNIDMSVNKGAWATSKTNEKRLNKAFQEGHIVYLIFSLQGSGHF
QGYAKMSSIIGTEKSYDYNGQGGVFSVDWVKRANLPFQMTHHLLNPWNENKRVQISRDGQ
EIEPSVGEALIHLWDRFPDNSGDHTLSEDPGVGWMGETGAARGHYTQGYNRHDYNEGQDY
GEEQVYQDQYWGGYQNSQRGRPWQPRGQGHMYQGHYGYQGHMMVLPRDGQNYKQQGYFQH
RK
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtaaaccaaaccagcgcccatccagtgcaggggggcgcagctcaggtcaaggc
tctcgcgggggcagaatgccagactgggggctgaggcccacacaggggcccaaactccat
gaagatgcgtgcatcagtgaggaggtcaagattggtatcaacctagctattgagaggttc
cgcatgaacgaacaacagaaagagctggagttcccatcctcactaactgccactgagaga
gcttacatccacagacgggcagaggagctggggctcaaacacaagagcaggggacagaat
gcttctcgccatctggtgctggctaagaaggaagggaccaaggcggacatccgaagtgca
gtgttgcagctcgtccgtagctccaagtttcagatcgccaacctcctgcagagattccca
ctcacaagcaaggagaaactggagctgcttccaaacatggataaagctatggtcaatgaa
gtgtccaaagaactggctcgtacagctacaggccgcctgaacaacggtcttccacaggtg
ccacctggccgtggtagctctgaactgtccagctttacacaagcactgcctgttaacaga
tacagggacacaatcctggataccatacgcaacagtcaagtctgtatggtgtctggtgag
accgggtctggcaaaactacacaggtgccccagatgatcttggatgactgccaccgcaca
gggactcagtgccgtatcttctgtacccagccccgccggatagcagccctcagtgtgtct
gagagggtggctgcggagaggggggagtccatcgggcagactgtaggctttcagatcagg
ctcgagtccagggtgtctcccaagaccctactgaccttttgtaccaatggagtgctgctg
aggacactgatgggtggggaaagtactatggacactgtcacacacgttattgtggacgag
gttcacgaacgtgacaagttctgtgacttcctgctcattactctgcgagacatcgcacag
cgcaattcccgtctcaagatcatactcatgtccgccactctcaacattgatctttttgtg
aagtacttttataattgtccggtagtgtcagttccagggaacttgtttcctgtcgaagag
catttcttggaggaagttcttacctggacaggttacacaaacaaaaagatgcaaaagtac
agagcagaaatgtcaaaaaaggcagagaaggaggcgcggctgtcagactgggtggacccg
cgggttgacgtgaggagggagagactcagacagaagtatggtagccaggaggaggaggag
ggggaacaggcggacaaggtgtctgataacaggaactcagtccttaaacagctggcccag
ctggggtcgtgccatgtagagaagggtgaggaggagctggagccctgggtacgggcggag
atggaccgctgtatgaccgagatatggctcacaggagacgcagaactcttctctcagctc
ttctacttcatctcgtcagagaacgtcagtgttgactaccagcactcagagacgtcagtg
actgctctcatgattgctgggggccgaggtttcccagccgtggtggaccagctgctatcc
ctggaagcagacccagacatcaagtcctccaatggatggacagctctcgactgggcgaga
aagttcaaccaggaggaggtcatagccctcctagaggctaatatgctggtgagtaagact
gaccggggtaaccaaggtgacccattagaggaggaggaggagggacaaggcatgtcagag
gagcagaaagagctgctcacgacctatcagcactgctggaacgatgacaaggtcgacatg
gaccttattgtggctctgttgaggatgatcgttaccaccaaacctgagggcgctgtgctg
atatttctaccgggatatgatgagatagtgtcattgaggtcacgtattgaagatgatgat
tccatcgccaatgttaggtacagcctgtactgcctgcactcggccatgcagaccagtgac
cagaggaaggtgttcaggccagcagaacatggagtcaggaagattattttggctacaaac
attgcagagaccagtataactatcaatgatgttgtgtatgtcatcaactctggaaaagta
aaagaaaaaacgtttgattcactcctgcaagtgaccatgctgaaaagtaactggatctcc
aaagccagcacagctcaaaggaagggcagagcgggtcgttgccgaccaggggtgtgttat
cacatgttcagtcgtgttcgctacagtcacatgtgtgactatcccactgcagaaatcctc
aggtgtccgctacaggagctgtgtctacagaccaagctgctggcccctgccaatgagaac
attgaggacttcctgtcgcgggcccctgaaccaccgccatacctggtcactagggcagct
ctcaacatactcaagctcatggatgccctggatggtggtcaggagctgacagagctaggg
cgccaccttgcagacctcccagtggagcctcacctgggcaagatggtcctacactccatt
gtgctcaagtgcctagaccccatactcaccattgtatgtgcaatctcgtacaaggaccca
ttcttgttgccggcgtgggcctcagagaagatggcggtgaaggggatcagaaaggacttc
tctgccaacactttcagtgaccacatggcccttctcagggtcttccaagcatggcagaag
gcccgtacagatggatgggagagaagtttctgtgacaagaactatgtgtctccagccgtg
atggagatgattgtagggatgagggctcagttacttggccagctgcgtgcttccgggttt
gtgcgtgcccgaggaggtggggacatccgggacttgaacacaaactctgagaactgggcg
gtggtgaaggctgccctctgtgctggggcctaccccaacattgtacgctgggaccaacag
gccaaaaaactcattggacagtcatcaggaaagattggtgtccacaagtcatctgtgttg
cccacagagcctcgcagcctgccatcagactggttgttgtatgaggagatgacccaggct
ggccagggatcctcctataccagtctggcctgcatacggtgctgcaccttagtgtccccc
atcacggtggcgctgtttgcaggaccagccaagctaccggcggatgctgtgaaggataac
ttgtcagacctggagggctgtggccctggagagtccagtgacagtgagaatgaggaccct
gatgacaacaagacctacctgctgcagctgtctgattggttggcatttagggtggaccct
gagtctgtaggcctgggagtacagctgaggcagaagtggcagggtctattcctccgtaga
atgagggccccctccaaacccatggcaccaggagacgaggcaataatctccacccttgtg
acagttctcattaatgaagagcaagccttgggtctacagcagcctgctggtataggacag
agacctaaacccatgtctgcagagagcatcatgtcaggtggagggagaggccagggtagt
gttcatgaggtgcagggggacatgtccaggcacagattctccacgtctgccaagaaggcc
accagcacaccacccaaacgcaaggacttcatgtccccaaagctgtcccagtccagttca
ggctctgcggtggccagccctgtgagcagtgtgggcacgccctccagtagtccccagggg
gtgcctgcaggagcgggcaggttttttgtcatgaagtgctccagtcctaggaacatcgac
atgtccgttaacaagggcgcctgggcaacctccaagacaaatgaaaaacgcctcaacaag
gcctttcaggagggtcacattgtgtacctgatattctccctgcaaggtagtggccacttc
cagggctatgcaaagatgtcgtccataattggcacagagaaatcctatgactacaatggt
caagggggcgtcttctcagtagactgggtcaaaagggccaacctgccattccagatgacc
caccatttgttgaacccctggaatgaaaataagagggtgcagatcagcagagacggacag
gagatcgagccctctgtaggtgaggccttgatacacctgtgggaccgtttccctgacaac
agtggtgaccacaccctgtctgaggaccctggggtaggctggatgggagagacgggggct
gctaggggccactacactcagggctacaacaggcatgattacaatgagggccaggactat
ggggaggaacaggtctatcaggatcagtactggggaggctatcagaacagccagcgaggt
cgcccctggcaacccagaggtcaaggtcacatgtaccaagggcattatggctaccaaggt
cacatgatggtgctgcctagagatggacagaactataaacagcagggatactttcaacac
aggaagtga
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integrated database retrieval system
