Dreissena polymorpha (zebra mussel): 127879570
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Entry
127879570 CDS
T08834
Name
(RefSeq) putative ATP-dependent DNA helicase Q1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dpol
Dreissena polymorpha (zebra mussel)
Pathway
dpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127879570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpol03019
]
127879570
03400 DNA repair and recombination proteins [BR:
dpol03400
]
127879570
Enzymes [BR:
dpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127879570
Messenger RNA biogenesis [BR:
dpol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
127879570
DNA repair and recombination proteins [BR:
dpol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
127879570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127879570
NCBI-ProteinID:
XP_052282470
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All DBs
Position
4:complement(119259462..119263674)
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AA seq
439 aa
AA seq
DB search
MADAMEIVINSQSITDALQKYCSEFQTNISELKPLQFKAVQTLLSKKDCICALPTGYGKS
LIYEILPFIVPKCIVIVIVPLNAIIEQQILKLYGQSFSMSMSIDTVDLSITKYFFFHPET
VLNSLEVNKLFRSVKFQDYNKFLVIDEAHCVIEWGGEFRKDFKRIYQLKSLVSCPILALS
ATITKAGQTEIAKCLHLTNYEVVSASPAKDNIKMVVMNRPSPNSKGNTSFTPYDYIFVPV
LQQLKSEIDNFEITIVYCKTINWIGYGYELAKQILGDEFYSGKPSEKTARVMMYHSSMEG
SDGKLKKHIVETLQTERSTIRLIIASVALGMGADLRHVKRVIHAGPPTSLETYIQEIGRA
GRSHDDALAILFFNKSDIASEHMTREMKDYCVNSTICRRSLVNQYFGFETQEVKQFSICC
DLCNNELGIEYDFSKLSAN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgatggaaatagttataaacagccagtcaattacagatgctttgcagaaa
tattgttcagaattccaaactaatatatcagagctcaaaccactacagtttaaagcagta
caaacattattatcaaaaaaagactgcatctgtgctctacccactggttatggcaaatca
ttaatttacgaaattttaccttttattgttccaaaatgtattgtgattgttattgtgcct
ttaaatgccataatagaacagcaaatactgaaactctatggacaatctttttctatgtct
atgagtatagacactgttgacttatcaattaccaaatattttttctttcatccagagact
gttttaaactctcttgaagtgaacaaactatttcgctctgttaaatttcaagattataac
aagtttcttgtaatcgacgaggctcattgtgttattgaatggggcggagaatttaggaag
gactttaaaagaatataccaactgaagtctcttgtaagttgcccaattcttgctttgtca
gcaacaataacaaaagcaggtcaaactgaaattgcaaaatgtctgcatttgactaactat
gaagttgtaagtgctagccctgcaaaagacaacattaagatggtcgttatgaatcgtcct
agtccaaactccaaagggaatacctcatttacaccatatgactatatatttgtaccggtt
ttgcaacaactgaagagtgagattgataattttgaaataactattgtatattgtaagaca
attaattggattggttatggatatgaacttgcaaagcaaatacttggtgatgaattctac
tcaggaaaaccatcggagaaaactgcaagagtcatgatgtaccattcatctatggaaggc
tctgatgggaagttgaagaaacatattgttgagacgttacagactgaaaggtctacgatc
cgactgataattgcatctgtggctctaggcatgggtgcagatttgaggcatgttaagagg
gtgattcatgctggacctcctacttccttagaaacttatatacaagagatcggcagagca
ggaagaagccatgatgatgccctggccattctcttctttaacaaatcagacattgcatct
gaacatatgaccagagaaatgaaggactattgtgtaaactcaactatctgccgaagaagt
ttagttaaccagtattttggttttgaaactcaggaagtcaaacagttttcaatttgttgt
gatttgtgcaataatgaactggggatagaatatgattttagtaaactgtcagctaactaa
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