Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_147816
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Entry
DICPUDRAFT_147816 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpp03016
]
DICPUDRAFT_147816
Enzymes [BR:
dpp01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DICPUDRAFT_147816
Transfer RNA biogenesis [BR:
dpp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
DICPUDRAFT_147816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Secretin_N_2
HA_Alsin
Motif
Other DBs
NCBI-GeneID:
10509961
NCBI-ProteinID:
XP_003284056
JGI:
Dicpu1_147816
UniProt:
F0Z9H3
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MMKDKFKGPNNNNQLFGNNIFQLPTTSSELKYKHYFGEFIGYGIKIIDFEQGQDLYRHGC
FGKGVLSRSTPVYDSIKDKIITGSGFHVKKGKFKKLNTNKRNREINSNNNISNDNGNNNN
DNNTDNDNIKDNRGLKQQKTFHSNDSIIVEKDDQIKSTTNIEENNCSNSIEFLQLSLCEA
FYLQYGLGCLTILRPVKLDDKLKDPSNIPNNGKKNMVKMGIEEAFKEFQLVEPDFVDKYI
VYHYFRSLGWIPRSGLKYGCDFILYKLKPDLIHAQYGIVIQKFNSNKSVDKNRLQTWDEL
SCINRVSETVAKGIIVCNVFKDDKDTDNNNNNNNNNNNNNNNNNNNNNNNNNITTTKIEF
LKELETLPEYLLNMWELKRWVPNRTRT
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagataaatttaaaggcccaaataataataatcaattatttggtaataatata
ttccaattacccacaactagcagcgaactaaaatataaacattattttggagagtttatt
ggatatggaattaaaataatagactttgaacagggtcaagatttatacagacatggttgt
tttgggaaaggtgtattatcaagaagtaccccagtttatgattcaataaaagataaaatt
ataactggttcaggttttcatgttaaaaaaggcaaatttaaaaaattaaacacaaataaa
agaaatagagaaataaatagcaataataatattagtaatgataatggcaataataataat
gataacaatactgataatgataatatcaaagataatagaggtttaaaacaacaaaaaaca
tttcattcaaatgacagtattattgtagaaaaggatgaccaaattaaaagtacaacaaat
attgaagagaataattgcagcaatagtattgaatttttacaacttagtttgtgtgaagca
ttttatttacaatatggcctgggatgtttaacaattttaagaccagttaaattggatgat
aaattaaaggatcctagtaatatacctaataatggaaaaaaaaatatggtaaagatgggg
atagaagaagcatttaaagaatttcaattagttgaaccggattttgttgataaatatata
gtttatcattattttagatcgctgggttggataccgagatcaggtttaaagtatggttgt
gattttatcctttataaattaaagccagatttaattcatgcgcaatatggtattgtaatt
caaaagtttaattcaaataaaagtgtagataaaaacagattacaaacatgggacgaacta
tcatgcataaatagagtatctgaaactgttgcaaaaggaattatagtttgtaacgttttt
aaggatgataaagatacagataataataataacaataataataataataataataataat
aataataataataataataataataataataataatataacaaccactaaaatcgaattt
ttaaaagagttagaaacactaccagaatatttattgaatatgtgggagttaaagagatgg
gtaccaaatagaacaagaacctaa
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