Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_150434
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Entry
DICPUDRAFT_150434 CDS
T02090
Name
(RefSeq) replication factor C subunit
KO
K10755
replication factor C subunit 2/4
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03030
DNA replication
dpp03410
Base excision repair
dpp03420
Nucleotide excision repair
dpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DICPUDRAFT_150434
03410 Base excision repair
DICPUDRAFT_150434
03420 Nucleotide excision repair
DICPUDRAFT_150434
03430 Mismatch repair
DICPUDRAFT_150434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpp03032
]
DICPUDRAFT_150434
03036 Chromosome and associated proteins [BR:
dpp03036
]
DICPUDRAFT_150434
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_150434
DNA replication proteins [BR:
dpp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DICPUDRAFT_150434
DNA Replication Termination Factors
ELG1-RFC complex
DICPUDRAFT_150434
Chromosome and associated proteins [BR:
dpp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DICPUDRAFT_150434
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DICPUDRAFT_150434
Check point factors
HRAD17(Rad24)-RFC complex
DICPUDRAFT_150434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L13e
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_16
Rad17
AAA_22
RCF1-5-like_lid
Viral_helicase1
AAA_11
AAA_5
NTPase_1
nSTAND3
AAA_assoc_2
AAA_28
Mg_chelatase
AAA_19
AAA_24
AAA_18
RNA_helicase
DNAX_ATPase_lid
ATPase_2
AAA_7
MCM
AAA_2
RuvB_N
AAA_3
AAA_30
RNase_3_N
T2SSE
IstB_IS21
AAA_25
ABC_tran
CbiA
AAA_23
Motif
Other DBs
NCBI-GeneID:
10503858
NCBI-ProteinID:
XP_003286464
JGI:
Dicpu1_150434
UniProt:
F0ZGB8
LinkDB
All DBs
Position
Unknown
AA seq
498 aa
AA seq
DB search
MATAAIDPLLPWVEKYRPIEIKDIVGNEETVSRLESISKDGNLPNIIISGPPGTGKTTSI
LCLARALLGPNYKEAVYELNASDDRTLDVVRDKIKSFAQKKVTLPPGRHKIIILDEVDSM
TSGAQQALRRIMELYSSTTRFAFACNQSTKIIEPIQSRCAVLRFTKLNNLQIAARLKEVM
TIEKVPFTDDGLEALIFTSEGDMRQALNNLQATFSGLGLVNAENVNRVCDQPHPKIIRAI
IEQCSKSNVNVAYKHLKTLWDEGFSSIDIISALFSLTKASTILPEYQKLEFLKEIGFCNL
RASTGHWDMRVRTWFNQPARKIRRRNNRIEKAAKVFPRPISTLKPVVRGSSIRYNMKVRA
GRGFTLEELKAAGLTAQYAKTIGIAVDFRRVNKSQQSLTLNAQRLKNYQSKLVLFPKKVS
APKKGEATKEEVAKAVQTLNVSPVKAGIKVSSEAPRKVTEEEKKFNAYASLKFADAKVKN
SGIRRKAAEKKAQAASEK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcagcaatcgatccattattaccatgggtagagaaatatagaccaattgag
attaaagatattgtcggtaatgaagaaactgttagcagattagaaagtatttcaaaagat
ggtaatttaccaaatattattattagtggaccaccaggaactggtaaaacaacatcaatt
ttatgtttagcgagagcattattgggaccaaactataaagaagcagtatatgaattaaat
gcatcagacgatagaactttagatgtagtcagagataaaatcaaatcatttgcacaaaag
aaggttacattaccaccaggtagacataagattattattcttgatgaagtcgatagtatg
acatctggtgcacaacaagcccttagacgtattatggaattatacagttcaacaacacgt
tttgcattcgcatgtaatcaatcaaccaaaattattgaaccaattcaatcaagatgtgca
gtattacgtttcaccaaattaaacaatcttcaaattgctgcacgtttaaaagaagttatg
actattgaaaaagtaccattcaccgacgatggtttagaagccttaatattcacctctgag
ggtgatatgcgtcaagctttaaataatctccaagccactttctctggtttaggtttagtc
aatgctgaaaatgtaaatagagtatgtgatcagccacatccaaaaattattagagccatc
atcgaacaatgttcaaaatcaaatgttaatgtagcctacaaacacttaaaaacactttgg
gacgaaggtttctcctctatcgatatcatctctgccttatttagtttaacaaaagcctcc
acaattttacccgaatatcaaaaattagaattcttaaaagaaattggtttttgtaatctt
agagcttcaactggtcactgggacatgagagtccgtacctggttcaaccaaccagctcgt
aagatcagaagaagaaataacagaatcgaaaaagctgctaaagtcttcccaagaccaatt
tcaaccttaaaaccagttgttcgtggttcatccatcagatacaacatgaaagttagagct
ggtcgtggtttcaccttagaagaattaaaggctgctggtttaactgctcaatatgccaaa
actattggtattgccgttgatttccgtcgtgtcaacaaatcacaacaatcattaacctta
aacgcccaacgtctcaagaattaccaatctaaactcgttctcttcccaaagaaagtttca
gctccaaagaaaggtgaagctaccaaagaagaagttgccaaagctgtccaaaccctcaat
gtttccccagtcaaagctggtatcaaagtttcatcagaagccccacgtaaagttactgag
gaagaaaagaaattcaacgcttacgcttcactcaaattcgctgacgccaaagtcaagaac
tcaggtatcagaagaaaggccgctgaaaagaaagctcaagctgcctctgaaaaataa
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