Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_153008
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Entry
DICPUDRAFT_153008 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DICPUDRAFT_153008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpp03036
]
DICPUDRAFT_153008
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_153008
Chromosome and associated proteins [BR:
dpp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
DICPUDRAFT_153008
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
DICPUDRAFT_153008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
10499273
NCBI-ProteinID:
XP_003288733
JGI:
Dicpu1_153008
UniProt:
F0ZMU4
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
MNNNNNSGNNRNNNNNEDIRKFFIPGWKPEDENKTTTTTTTTTTATMAQQNEKPSFLRKA
SKGPNTQNNQIYHGKRSSSYPTQFDNFKNNFNKNDNKSGLPKQFNSLTNRNNINNTNRNI
NNRTNYNNNNNNNNNNNNNYRSNYNNSQLNLSNLGVQQFTSNEVETRVIQKIDKRLTISE
INDLEKDLKKFKKEKDEVEAFLFKNSERELNSNKKDMDKDTFDSLIVLVNSKKKRLQEIR
SIERDIENKIHSRKEQLRIDREKRLSEQNSANDDKQPNVNLNSPSFLDKALGLSSNSNNL
IGGNDQQDRDLLIRTGKITPFDNIPRKKTILLDSIQDINPQDTDDSKSKPTDKVSKVAMK
PNKKSTNPFNIKKKPLSAKQKKKQQKMNKYNIQREAPKKLQEFYDDFGDLDSNFLNVTDQ
NSNSNSEKEDEDEDENENENENEKPNKKEKKVKAKKKKTPKTSTLTTLVTPPNELNPSNI
SLSGRIRTPLNRIGLVEKEKEIDESDGDNEEMDDEEMDVSDKDDDYIEIDDEEDNNLTNQ
EDEDFEKEFTIKDNKRKRNNDINTKKKKTKKSNEEDEEEESYEEEESYEEEEERINIHKE
RWADDANEDLYQKRLFEWKQRQIQNHYKKMNLDKRLEIIEKYTGTINNNTTPSTTNDDED
ANQTYKEDEEDDYLNPDKLDNETVFGEIENQVKNILNEEELVEEEEIGDDFQIDENFKIP
FDIYKNLFEYQVTGVRWLYELHCQEAGGIVGDEMGLGKTIQIVSFLASLHYSRRLGGPAL
IVAPATLLSNWVKEFHKWWPPFRVGLFHSSSSSLSKDDIVKKIASKGHILLTTFEQIRIH
QDILLEHHWDYVILDEGHKIRNPDAEVTLSCKQFQTCHRIILSGSPIQNKLTELWSLFDF
VYPGKLGTLPIFKTQFSLPISVGGFANASPIQVQTAYKCAVALRDLISPYMLRRIKADVL
KSLPSKNEQVLMCPLTNFQEKLYLEFLDSNDIKSVLEGRRNALYGIDILKKISNHPDILH
MDPHDEDRPEDYGNINRSAKLRVVDQILPLWYKQGDKVLLFCQTRQMLDIVEAYIRNSTT
FNYLRMDGTTSVKHRQSLVEEFNLDEKLFIFLLTTKVGGLGLNLTGANRVILFDPDWNPS
TDTQARERVYRIGQKKSVTIYRLVTLGTIEEKIYHRQIYKQFLTNKILKDPRQKRFFKSK
HFKELFTYSKSNKGSETGNIFSESNSEILPEHMKDSDNEEDINNNNNNNKSNKSKLSSSN
LPSIPKKQNNDYIDSSSDEEKTKVNKKRKSNKSNSIDDENGGNDEKSNSNDDDSYILKCL
FEKEGLKSALRHDTIMDQSGPEHSLLVNEAEKIASKAVGILKKSKELIDRQRSSSSTLTW
TGRFGSSGLPTLMNSNNNTGRFGQKSKLQSQLSPLQSISNITVDSDNILLNKSITNNNSN
NTNNNNTNTNNKFSSTRILSTLNNKEEEDAKNLFGGLNSNEIIEKIFNFIMEKGGSVTTQ
TIINNFSLTINEDQAPLFKALLRSVSDFDKVSKRWVVKSEFLLN
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataacaatagtggtaataatagaaataataataataatgaagatataaga
aaattttttattccagggtggaaacctgaagatgaaaataaaacaacaaccactaccaca
accacaaccactgcaactatggcacaacaaaatgaaaaacctagttttttaagaaaagct
tcaaaaggtccaaatacacaaaataatcaaatttatcatggtaaaaggtcatcgtcatat
cccacacaattcgataattttaaaaataattttaataaaaatgataataaaagcggttta
ccaaaacaatttaatagtttaacaaataggaataatattaataataccaatagaaatata
aataatagaacaaattataataataataataataataataataataataataataattat
agatcaaattataataattcacaactaaacttatcaaatttaggtgtacaacaatttaca
tccaatgaagttgaaactagagttattcaaaagattgataaaagacttactattagcgaa
ataaatgatttagaaaaagatttaaagaaatttaaaaaagaaaaggacgaagttgaagcg
tttttatttaagaacagcgaaagagaattaaacagtaataaaaaggatatggacaaagac
acatttgactcattaatagttttggtaaattcaaaaaaaaagagattacaagaaatcaga
tcaattgaaagagatatcgaaaataaaatccattcaagaaaagaacaacttagaattgat
agagagaaaagattatccgaacaaaatagtgccaatgatgataagcaacccaatgtaaat
ttaaattcaccaagttttttagataaagcactaggtttatcaagtaatagtaacaaccta
attggtgggaatgatcaacaagatagagatttattaattagaactggtaaaattactcca
ttcgataatatcccaagaaaaaaaaccattctattagactcaattcaagatattaatcca
caggacactgatgactctaaatcaaaaccaacggataaagtttcaaaagttgcaatgaaa
ccaaataagaaatctaccaatccttttaatattaaaaagaaaccattatcagcaaaacaa
aaaaagaagcaacagaaaatgaacaaatataatattcaaagagaggctccaaagaaatta
caagaattttatgatgattttggtgatttagattcaaattttttaaatgtgaccgatcag
aattcaaatagtaatagtgaaaaagaagatgaagatgaagatgaaaatgaaaatgaaaat
gaaaatgaaaaaccaaataaaaaagagaaaaaagttaaagccaaaaagaaaaaaacacca
aaaacttcaactttaacaactttagtaacaccaccaaacgaattaaatccatcaaatata
agcctaagtggtagaataaggacacctctaaatagaattggtctcgttgaaaaagaaaaa
gaaattgatgaatctgatggtgataacgaagaaatggatgatgaagaaatggatgtctct
gacaaggatgatgactatattgaaattgatgacgaagaagacaacaatttaactaatcaa
gaagatgaggattttgaaaaagaatttacaattaaagataataaaagaaaaagaaataat
gacatcaataccaaaaagaaaaaaacaaagaaatcaaatgaggaagatgaagaagaagaa
tcttatgaggaagaagagtcgtatgaagaagaggaagaaagaattaacattcacaaagaa
agatgggctgatgatgcgaatgaagatttatatcaaaaaaggttgtttgaatggaaacaa
agacaaattcaaaatcactataaaaaaatgaatttagataaaagattagagattattgaa
aaatataccggcacaatcaataataatacaacaccttcaacaacaaatgatgatgaagat
gcaaaccaaacctataaagaagatgaagaagatgattatttaaatccagataaattagat
aatgaaacagtttttggtgaaattgaaaatcaagttaaaaatatattaaatgaagaagaa
ttggtcgaagaagaagaaattggtgatgattttcaaattgatgaaaattttaaaattcca
tttgatatctataagaatctattcgaatatcaagtcactggtgtacgttggctttatgaa
ctccattgtcaagaggcaggtggtatagttggtgatgaaatgggtttaggtaaaacaatt
caaattgtatcatttttagcatcacttcattacagtagaagacttgggggtcctgcactt
attgttgcacccgcaactttactatcgaattgggttaaagaatttcataaatggtggcca
ccattcagagttggtttattccattcatcatcatcgtcattatcaaaagatgacatagta
aagaaaatagcatcaaagggtcatattcttttaactacttttgaacaaatccgtatacat
caagatattttactggaacatcactgggactatgtaatattggatgaaggtcataaaatt
cgtaatccggatgcagaggtcacattatcatgtaaacaattccaaacttgtcatcgtatt
attctttctggttcaccaattcaaaataaacttacagagttatggtcacttttcgatttt
gtatatccaggaaaattaggaactttacccatttttaaaactcaattctcattaccaata
tcagttggtggttttgcaaatgcttcgcctatccaagtccaaaccgcttataaatgtgct
gttgctttacgtgatttaatttcgccatacatgctcagaagaattaaagccgatgtatta
aaatctctcccatctaaaaatgaacaggttttgatgtgtcctttaacaaatttccaagag
aagctttatttagagtttttagatagtaacgatataaaatctgtgctcgaaggaagaagg
aatgcactctatggtatcgatatcttgaaaaagattagcaatcatccagatattctacat
atggaccctcatgatgaagatagacccgaggattatggtaacattaatcgttctgcaaag
ttgcgtgtagttgatcaaattttaccactctggtataagcaaggtgataaagttttactc
ttttgccaaactagacaaatgttggatattgtagaagcatatattagaaattcaacaact
ttcaactatttaagaatggacggtacaacttcagttaaacatagacaatcattggttgaa
gagtttaatcttgatgaaaaactatttatttttttgttaacaactaaagttggtggtctt
ggtttaaatcttacaggtgcaaatagagtaattttattcgacccagattggaatccatct
accgatactcaggccagagaaagagtgtatagaattggtcaaaagaaatctgttaccatt
taccgtttagtaactcttggtacaattgaagaaaaaatatatcatcgtcaaatctataag
caatttcttacaaataaaattttaaaagatccaagacaaaaaagattcttcaaatcaaaa
cattttaaagaattatttacatattcaaagagtaacaaaggttccgaaactggtaatatt
tttagcgaatcaaattcagaaattttacctgaacatatgaaggatagtgataatgaagaa
gacattaacaataataataataataataaatcaaataagagcaaactttcttcttccaat
ttaccaagtataccaaaaaaacaaaataatgattatatagacagttcatcagatgaagaa
aaaacaaaggttaataaaaagagaaaatcaaataaaagtaattcaattgatgatgaaaat
ggtggcaatgatgaaaaatcaaatagtaacgacgatgactcttatatattaaagtgctta
tttgaaaaagaaggtttaaaaagtgctttaagacatgacaccattatggatcaatctggt
cctgaacattctttattagtaaacgaagcggagaagattgcatcaaaagctgttggtatt
ttaaaaaaatcaaaagaattaatcgataggcaaagatcatcatcatcaactctaacatgg
actggaaggtttggatcttcaggtttaccaacactaatgaatagtaataataatacaggt
agatttggtcaaaaatcaaaattacaatcacaactatcaccgcttcaatcaataagtaat
attacagtagactctgataatatacttttaaataaatcaattacaaataataatagcaac
aatacaaataacaataatacaaataccaataataaattctcttcaactagaattttatca
actttaaataataaagaagaggaagatgctaaaaacttgtttggtggtttaaattcaaac
gaaattatagaaaaaatctttaactttatcatggaaaaaggaggctctgtaacaacccaa
acaattataaacaatttctcacttactataaacgaagaccaagctcctttatttaaagct
ttgttaagaagtgtttccgattttgataaagtttcaaaacgttgggttgttaaatctgaa
tttttattaaattaa
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integrated database retrieval system
