Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_153358
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Entry
DICPUDRAFT_153358 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DICPUDRAFT_153358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_153358
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DICPUDRAFT_153358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
HAT
TPR_Slam
TPR_19
TPR_8
TFIIA
TPR_17
DUF6827
Motif
Other DBs
NCBI-GeneID:
10499790
NCBI-ProteinID:
XP_003289032
JGI:
Dicpu1_153358
UniProt:
F0ZNP6
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MESEGNNTDNNGIENQSTTSSNEQSVNSNNNNNNNNNETKATTPSPPTATKATTTPSPVV
SPTASSLLSSPTNTSSTNAASPSTIATASPNTTASTTTSTTSTSTSNVSPSTQPSGPLAI
SSSMPAVGKRLNVQIETLENRINNDMYDTEAWTLLLNEVQSQPISIARDIYQRFLAVFPT
AGRYWKLYVEQEMAEKNYEIVEKIFLENLRNVKNVEFWKTYINYIKQVKSDSNNREEIIK
AFEFALESVGMDISSTSIWTDYIAFLKEEKATTPFEEGQKMTGIRKLYQRAIENPMHDLD
NIYKEYEVYENSINKTLAKALLADHQNRYQHARNVYRDRKALLEGILRNMLAKPPRSSDK
EEHQVRLWRKLISFERSNPQKFDPVVLRNRVVATYNQCLLCLYHYPDIWYEAATYQADSG
NVDGCISMFDRAIQALPKNLFIHFAYADFLESQKKTQQAKEIYEKIITNNPEPLVWIQYM
KFSRRTERVEGPRKIFKRAKSTPECTYHVYIALGLIEYYINQDTRMARDIFEIGLKKFPN
EIAFINFYIEFLTNLNEENNTRVLFEKLLSNQALEKSEPLWKKFLDFEYRQNQDVASIFK
LEKRYQVSVPSSDKTGVLQALNRYKFLNLWSCHPTEIEIITKNILEDHTGTDHHKDVDSK
DDTGADGTAKSKLGKTSKKGKNKEAKNQPVAAPVETKSTSSTIIPVSTWKVKRPDLTQMI
PYRSEIGKFTPSSVIPLNQQQQQQQQQQLLQQQRGNIPDFIVFFLQNLPNVNQFNGPFVD
PDQLINLIRDTPLPGMQSGFNQQQQQVLQRQQQMNQQSQQQQQQQPPLRASPTISPENIN
LNPTTNAKPSNIHKRKQIEESSLEDVNSPSTLPTSNPSNQTPSASKAPSNDIYRKRQANK
LSKKS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgaaggtaacaataccgataataatggtattgaaaatcaaagcacaactagt
agtaatgaacaaagtgtaaatagtaataataataataataataataataatgaaactaaa
gcaactacaccatcgccaccaacagcaaccaaagcaacaactacaccatcacctgtagtc
tcaccaacagcatcttcattgttatcatcaccaactaatacatcatctacaaatgcagct
tctccatcaactatagcaacagcttcaccaaacactacagcttctactacaacatccact
acctctacttcaacctcaaatgtatctccatcaacacagccatcaggaccattggctatt
tcatcatcaatgccagcagttggcaaaagattgaatgttcaaattgaaactttagaaaat
agaattaataatgatatgtatgatacagaggcatggactttacttttaaatgaagtacaa
tcccagccaatttcaattgcaagagatatttaccaaagatttttagcagtttttccaaca
gcaggtagatattggaaattatatgttgaacaagaaatggcagagaaaaattatgaaatt
gtagaaaaaatatttttagaaaatttaagaaatgtaaagaatgtcgaattttggaaaact
tatattaactatataaaacaagtaaagagtgacagtaataatagagaggaaataattaaa
gcatttgaatttgcattggaaagtgttggtatggatatttcatcaacatctatttggact
gattacatagcgtttttaaaggaagaaaaagcaacgacaccatttgaagaaggtcaaaaa
atgacaggtattagaaaactttatcaacgtgctatagagaatccaatgcacgacctcgat
aacatttacaaggagtatgaagtttatgaaaactcaattaataaaacattggcaaaagca
ttgttagcagatcatcaaaatcgatatcaacatgcccgtaatgtttatcgtgatagaaaa
gctttgctcgaaggtattcttagaaacatgttggcaaaaccaccaagatcatcagataaa
gaagaacatcaagtaagactatggagaaagttaatttcatttgaacgttcaaaccctcaa
aaatttgatccagttgttttaagaaatcgtgtagttgcaacttataatcaatgtttactt
tgtttgtatcattatcccgatatttggtatgaggctgctacatatcaagccgatagtggt
aatgttgatggttgtatttcaatgtttgaccgtgccattcaagctttaccaaagaattta
tttattcattttgcttatgctgactttttagaatctcaaaaaaaaactcaacaagctaaa
gaaatttatgaaaaaatcattacaaataatcctgaaccattagtttggattcaatatatg
aagttttcaagaagaaccgagagagttgaaggaccaagaaagatttttaaaagagcaaaa
tcaacaccagaatgtacatatcatgtttatattgcattgggtttaattgagtactatatt
aatcaagatactagaatggcaagagatatttttgaaattggtttaaagaaattcccaaat
gaaatagcatttattaatttttatatcgagtttttaacaaatttaaatgaagaaaataac
accagagttttatttgaaaaattattatcaaaccaagctttagaaaaatctgaaccatta
tggaaaaagtttttagattttgaatatagacaaaatcaagacgtagcatcaatatttaaa
ttagagaaaagatatcaagtatcagtaccaagttctgataagacaggtgtattacaagca
ttaaatagatataagtttttaaatctttggagttgtcacccaaccgaaattgaaatcatt
acaaagaatattttagaggatcatacaggtacagatcatcataaagatgttgatagtaaa
gatgatacaggagcagatggcacagctaaaagtaaacttggcaaaacaagtaaaaagggt
aaaaataaagaggcaaagaatcaaccagttgctgcaccggttgaaaccaaatcaacctct
tcaactattattccagtttctacttggaaagttaaaagaccggatttaacccaaatgata
ccctaccgtagtgaaattggtaaatttaccccatcatcagttatcccattaaatcaacaa
caacagcaacagcaacaacaacaattattacaacaacaaagaggaaacattccagatttt
attgtatttttcttacaaaacctaccaaatgtaaaccaatttaatggtccttttgtggat
cctgatcagttaataaatttaattagagataccccattaccaggtatgcaaagtggcttt
aatcaacaacagcaacaagtattacaaagacaacaacaaatgaatcagcaatcacaacag
cagcagcaacaacagccacctttaagagcatcaccaacaatatctcctgaaaatataaac
cttaacccaactaccaacgctaaaccatcgaatatacacaaaagaaaacaaattgaagaa
tcttcattggaggatgttaattcaccttcaactcttccaacatcaaatccttccaatcag
accccaagtgcctctaaagctccttcaaatgatatatacagaaagcgacaagccaataaa
ctttctaaaaagtcttaa
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