Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_154178
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Entry
DICPUDRAFT_154178 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_154178
03016 Transfer RNA biogenesis [BR:
dpp03016
]
DICPUDRAFT_154178
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICPUDRAFT_154178
Spliceosome [BR:
dpp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
DICPUDRAFT_154178
Transfer RNA biogenesis [BR:
dpp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
DICPUDRAFT_154178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
UTP25_NTPase-like
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
10503074
NCBI-ProteinID:
XP_003289732
JGI:
Dicpu1_154178
UniProt:
F0ZQN9
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MSAFEDLGVLPEIIKAIEELDWLLPTPIQSEAIPLILGGGDILAAAETGSGKTGAFALPI
LQITYETLNNKADIPVLPEDQSSNESKDNGIEWDQLNRDRELAVDGLVCQARSAAWNGIR
ATKGISSGKFYYEAIIRDEGLCRVGWALSKATRNIGTDKFSWGYGGTGKKSHQGTFADYG
KPFGNNDCIGCYINFDDEVMGYTKNGEDFGEAFTFNSKAGIFYPALVLKNAEIAFNFGKD
PMKHQLKGYKPLIEAELLADQASAPAPEPSNNKNIKKSNKKEKEDKSTNTQSDKPRKPLS
LIIEPTRELADQTYSAILNFSKYLDNPNIQVSLCIGGEKSLGGRNKIEGDIIIGTPGRLE
SLVKDGSIDLSSIRFFVLDEADQLIEDNLSIVNYIYNKLPIGQNLQILFFSATLHSNKVI
KFSEQITKNPTWVDLKGKDFIPDLITHAYIKADPSKYETLWRDSENPLRIRTDGVHAMDV
TKFGKLKEPEQKSEAIKLLKAQLLLKCIQSFKMDQAIIFARTRVDCDCIHNFLKEAGGES
TKSGLEGEYSSTVLHGDVNKARKENLEKFKNGEVRFLICTDVAARGIDIRGLPFMINYTL
PASFEDYIHRVGRVGRADRIGLAISLVGSDQEKVWYHTCRDKGRGCHNTKLTENGGCCIW
YDEPELFHPIQESIGPVELNDQFQLPQDMNLTFGASSNKSLVLDYQPHTEELSSRVEQLS
QLEQTIQRDYLSLPIRITEIVNNNNNKMKS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatttgaggatttaggtgttttaccagaaattattaaagcaatagaagagtta
gattggttattaccaacaccgattcaaagtgaagcaattccattaattttaggtggtggt
gatattttagcagcagcagaaacaggttcaggtaaaaccggtgcattcgcattaccaatt
ttacaaattacatacgaaacattaaataataaagcagatataccagttcttccagaagat
cagtcatcaaatgaatcaaaagataatggtattgaatgggaccaattaaatagagataga
gagttagcagttgatggattggtttgtcaagcacgttctgcagcatggaatggtattaga
gctaccaaaggtattagttcaggtaaattttattatgaagctattattagagatgagggt
ttatgtagagtcggttgggcattaagcaaagcaacaagaaatataggtacagataaattt
tcatggggatatggtggcacaggtaaaaaatcgcatcaaggtacgtttgcagattacggt
aaaccatttggaaataatgattgtattggctgctatataaatttcgatgatgaggtaatg
ggttatacaaagaatggcgaagactttggtgaggcttttaccttcaattcaaaagcaggc
atcttttatccagcattggttttaaagaatgctgaaatagcttttaattttggtaaagat
ccaatgaagcatcaattgaagggttataaaccattaatcgaagccgagttattagccgat
caagcatcagcaccagcaccagaaccatcaaataataaaaatattaaaaaatcaaataaa
aaagaaaaagaagataaatcaacaaatacacaatcagataagccacgtaaaccattatca
ttaattattgaacccaccagagagttagcagatcaaacatatagtgcaattttaaatttt
tcaaaatatttagacaatccaaatattcaagtatcgttgtgtattggtggtgaaaaatca
ttgggtggtcgtaataaaatagagggcgatattattatcggtacaccaggtagattagaa
tcgttggttaaagatggatccatcgatcttagttcaattaggttctttgttttggatgag
gctgatcaattaatcgaagataatttatcaatcgttaattatatctacaacaaactacca
attggccaaaatcttcaaatattattcttttcagctacactccattcaaataaagtcatt
aaattctctgaacaaataacaaagaatccaacatgggtcgatttaaagggtaaagatttt
atacctgatttaattacccatgcctatataaaggctgatccatcaaaatatgaaacctta
tggagagattcagaaaacccacttcgtattcgtacagatggtgtacatgcaatggatgta
actaaatttggtaaacttaaagaaccagaacaaaaatccgaagctatcaaactcttaaag
gcccagttactcttaaagtgtattcaatcattcaaaatggatcaagctattatctttgca
cgtactagagttgattgtgattgcattcataactttttaaaagaggcaggtggtgaaagt
accaagtcaggattagagggcgagtattcatccacagtgcttcatggtgatgttaataag
gctcgtaaagaaaatttagagaaatttaagaatggtgaagttcgttttttaatttgtaca
gatgtagcagctagaggtatcgatattagaggattaccattcatgattaattacacatta
ccagcatcattcgaggattatatccatagggtcggcagagtcggtagagctgatcgtatc
ggtctagcaatttcattagtaggtagtgatcaagaaaaggtttggtatcacacttgtcgt
gacaaaggtagaggttgtcataatactaaattaactgaaaatggtggttgttgcatttgg
tacgatgagccagagcttttccatccaattcaagagtcaattggtccagtcgaattaaat
gatcaattccaattacctcaagatatgaatttaacttttggtgccagtagtaataaatct
ttggttttagattaccaaccacacaccgaagaattatcatcaagagttgaacaactatct
caattagaacaaactattcaaagagattatttatctttaccaattcgtataacagaaatt
gtaaataataataataataaaatgaaatcttaa
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