Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_154363
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Entry
DICPUDRAFT_154363 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_154363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_154363
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DICPUDRAFT_154363
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DICPUDRAFT_154363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
10504260
NCBI-ProteinID:
XP_003289905
JGI:
Dicpu1_154363
UniProt:
F0ZR58
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MNPNNPNLLKSPSRKSTPPNQPMQYNTNKDDIDHEQPPHPGMMNYVNYSNPNMNYNFNMQ
QRGHVNDMMSRQGPPHMMQQPQNIQGFRPPPNMMGPPHVRAGNVGMGPMPVNINNMGMNS
NVNISNNNNSVNNSNNLRSSLTTTPTVVSPQQQQQQQSQPSLSRSNPNTPTNTTTTSSVT
TSPNIQQQQHQQRINDNIVNRGIQSMLPQQFNTQKAQQQQQQQQQSPQQSPQQNYNNNTN
NNNYGDGDFPALRKSKNANKNVEDTSLIQNLGFDNSHEEYQRKDYNIVDKDNGKYGLMGL
LNVIKNTDMDASMLSIGIDLTGELYESFGSPWVEFSAQRKSEYYIPLCYSTPNLESPTYK
MTLFTYETLFYIFYSMPKDILQLHAANELYDRNWRYHKEGKVWLTKVQGTESTINPTFEV
GSFFFFDVVQWATVRRDNFYLPHEVLETKESLIAQVNKAEQQLLSLQQQQAAAAAAAAQQ
NGQPSPSQSSPQHTSPQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaacaatccaaatttattaaagagtcctagtagaaaatccactccaccaaat
caaccaatgcaatataatacaaataaagatgatatcgatcacgaacaacctcctcatccc
ggtatgatgaattatgtaaattattccaacccaaatatgaattataattttaatatgcag
caaagaggacatgtcaacgatatgatgtcaaggcaaggaccaccacatatgatgcaacaa
ccacaaaatatacaaggatttagacctccaccaaatatgatgggaccaccacacgtaaga
gcgggtaatgttggaatgggacctatgccagtaaatataaataatatgggtatgaatagt
aatgttaatattagcaataataataatagtgttaacaacagcaacaacttgagatcatca
ttaaccacgacaccaacagtcgtatcaccacaacaacagcaacaacaacaatcacaacca
tcgctatctagatcaaaccctaatacaccaaccaatactaccaccactagtagtgtcaca
acttcaccaaacatccaacaacaacaacaccaacaaagaattaatgacaatattgtaaat
agaggtatccaaagtatgttacctcaacaatttaatacccaaaaagcacaacaacaacaa
cagcaacaacagcaatcaccacaacaatctcctcaacaaaactataataacaacaccaac
aataataactatggtgatggcgatttcccagctttaagaaagagcaaaaatgcaaataaa
aatgtagaagatacaagtttaattcaaaatttaggatttgataattcacatgaagaatat
caaagaaaagattataatattgtagataaagataatggcaaatatggcttaatgggttta
ttaaatgtaattaaaaatacagacatggacgcaagtatgctttctattggtattgacttg
actggggaattatatgaatcatttgggtcaccatgggttgaattctcagctcaaagaaaa
tctgaatattatatcccgttatgctactcaacaccaaatttagaatcaccaacttataag
atgactttattcacctacgaaacattattttatattttttattcaatgccaaaagatatt
cttcaacttcatgcagccaacgaattatacgaccgtaattggagatatcacaaagaaggt
aaagtttggttaaccaaagttcaaggtaccgaatcgacaataaaccctacctttgaagta
ggttctttctttttctttgacgttgtacaatgggctacagtacgtagagacaatttttat
cttccacacgaagttttagaaactaaagaatctttaatcgctcaagtaaataaagccgaa
caacaattactatcattacaacaacaacaagctgccgctgccgctgctgccgctcaacaa
aatggtcaaccctcaccatcacaatcatcaccacaacatacttcaccacaataa
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