Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_156303
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Entry
DICPUDRAFT_156303 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03013
Nucleocytoplasmic transport
dpp03015
mRNA surveillance pathway
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_156303
09122 Translation
03013 Nucleocytoplasmic transport
DICPUDRAFT_156303
03015 mRNA surveillance pathway
DICPUDRAFT_156303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_156303
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_156303
03009 Ribosome biogenesis [BR:
dpp03009
]
DICPUDRAFT_156303
03012 Translation factors [BR:
dpp03012
]
DICPUDRAFT_156303
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICPUDRAFT_156303
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DICPUDRAFT_156303
mRNA cycle factors
Stress granule specific factors
DICPUDRAFT_156303
Spliceosome [BR:
dpp03041
]
Complex C
Other components
EJC/TREX
DICPUDRAFT_156303
Ribosome biogenesis [BR:
dpp03009
]
Eukaryotic type
90S particles
Helicases
DICPUDRAFT_156303
Translation factors [BR:
dpp03012
]
Eukaryotic type
Initiation factors
eIF-4
DICPUDRAFT_156303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
CMS1
AAA_30
tRNA-synt_1b
TniB
AAA_22
Herpes_UL92
Motif
Other DBs
NCBI-GeneID:
10507868
NCBI-ProteinID:
XP_003291680
JGI:
Dicpu1_156303
UniProt:
F0ZW88
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MTSKSTKQPPPSTFTATEVEVKPTFESMGLGEELLRGIYNYGFEKPSAIQQRAIVPIIKG
RDTIAQAQSGTGKTATFSIGALQCIDVNVRSPQALILSPTRELAQQIQKVALALSEYMNV
QVHACVGGKNMSDDIKKLETGVHIVSGTPGRVLDMITRKSLSTRHIKMMILDEADEMLSL
GFQQQINDVYRYLPEATQIVLVSATLTQDVVTMTEKFMSKPVRILLKRDELTLDGIKQFF
VSVEKEEWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEKMREANFTVASMHGDMVQKE
REEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYLHRIGRSGRFGRKG
VAINFVKNSDIRILRDIEQFYSTQIDEMPMNFADAIN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaaatcaactaaacaaccaccaccatctacttttactgcaacagaggtcgaa
gtcaaaccaacattcgagtcaatgggtttgggtgaagagttattaagaggtatatataat
tatggttttgaaaaaccatcagcaattcaacagagagcgattgtaccaattattaaagga
agagatacaattgcacaagcacaatcaggtacaggtaaaacagcaacattttcaattggt
gcattacaatgtattgatgttaatgtacgttcaccacaagcattaattttatcaccaact
agagagttggctcaacaaattcaaaaagtagcattagcattatcagagtatatgaacgtt
caagtacatgcatgtgttggtggtaaaaatatgagcgacgatataaagaaattagaaaca
ggtgtacatattgtatcaggtactccaggtcgtgttttggatatgattacccgtaaatca
ctctctacacgtcatattaaaatgatgattttggatgaagccgatgaaatgttatcttta
ggtttccaacaacaaattaacgatgtatatagatatcttccagaagcaactcaaattgtt
ttggtttcagctactctcactcaagatgttgttactatgaccgaaaaattcatgtcaaaa
ccagttcgtattcttttaaagcgtgatgaacttactttagatggtattaagcaatttttt
gtctctgtagaaaaagaagaatggaaatttggtacactttgcgatatttatgatagttta
acaattactcaagctgtaattttttgtaacactaaaaagaaggtagatcaattaacagaa
aaaatgagagaggcaaatttcacagttgcctcaatgcatggtgatatggttcaaaaagaa
agagaagaaattattaaatcatttagatctggtgaaaaccgtgttttaattactacagat
attttagctcgtggtatcgatgttcaacaagtttcattagttataaattatgatttacca
attgatcgtgaaaattatcttcatcgtattggtagatcaggtagatttggtcgtaaaggt
gttgctattaattttgttaaaaattcagatattagaattcttagagatattgaacaattt
tattccactcaaattgatgaaatgccaatgaattttgcagatgcaatcaattaa
DBGET
integrated database retrieval system
