Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_159167
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Entry
DICPUDRAFT_159167 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_159167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_159167
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_159167
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DICPUDRAFT_159167
Messenger RNA biogenesis [BR:
dpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DICPUDRAFT_159167
DNA repair and recombination proteins [BR:
dpp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DICPUDRAFT_159167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
NumbF
NCH2
Motif
Other DBs
NCBI-GeneID:
10506279
NCBI-ProteinID:
XP_003294206
JGI:
Dicpu1_159167
UniProt:
F1A3G1
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MNNKIEQYLDNNEEVLYKYLKKYFGLTTFRPKQLEIIKHTLKGYDSFVSIATGGGKSLCY
QLPSLLLKKTTFVISPLKSLISDQTIKLRSLGIKAIKLSSDIKDSSKEYNDIFKGLYRIV
FITPERLVNEVMSINKLVENNGVCLFAVDECHCVSQWGTDFRPSYRRLDILRNMFPNVPT
MALTATSTTEVENDIIEVLQLQNDNFKIFRSPKNRENIFYKAIYKETENKDYEMILKIIN
ETRKSIGGVSNSTIIYCPTIQTSIDLNQYLQANKILSNCYHSQMSDPQREQVLKQFLFNK
TEVVCATIAFGMGIDKHDIRVIIHYGPSKSVEEYYQESGRAGRDGLPSLSLVFFSLQDFT
KGSLRINFGGNHQTKSNKIDKLTQLKNIMVNRTECRRKAILSVFNEQYSVPPNGCGGCDN
CTEEKDTSNLLELTHESRILINCIFEAGQSCGMKTIINILRGSTSSDLAQKHLKNSYYGK
GISFSLKFWKELANQLKTLDYLTETTSNVYTITKFSKKGWELYKSPDLKVFIGSNKILKD
EYKLTNFYKNQLSSKKLSTSISISSTISPSKNNIISNKWSVLAAPTSNSNIQSLFQILVE
YRKSLSALTEIPEFLLFSEKTLRHIAETRPSSLDSLRLIEGLEEKKIKDHGNSILLKVKE
FSKQKSLNLDNFPSNNNKNNNNSNNNNNVNNNNNKITSTISHIPEPPKSQKDKNNISTIF
NIIKGFNTSPQSKQKLDANDNNNNNNNTSFQFNVRSSSTGSLNSSSDSINNISKSDSSNN
ILGEKRKSDLSNTGDNKRFKISVKNLSFAEIYNHKPSLTPINYFDIKNHFKSIRDQSYRN
NPKRIPPKQ
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataagatagagcaatatttagataataatgaagaagtattatacaaatattta
aaaaagtattttgggttaacaacattcagaccaaagcaattagaaatcattaaacacaca
ttaaaaggctatgactcttttgtgtctattgcaacgggtggtggcaaatcgttgtgctac
caactaccatcattattgttaaagaaaacaacttttgtaatctctccattaaaatcttta
atttcagatcaaacaataaaattaagatcattaggtattaaagcaattaaattatcaagt
gatattaaagattcatcaaaagaatataatgatatatttaaaggattatatagaatagta
tttataactccagaaagattggttaatgaagtaatgtcaataaataagttagtagaaaat
aatggagtatgtttatttgcggttgatgaatgtcattgtgtcagtcaatggggtactgat
tttagaccaagctatagaagattagatattttaagaaatatgtttccaaatgtaccaaca
atggccttaaccgctacaagtaccacagaagtcgagaatgatattattgaagtgttacaa
ttgcaaaatgataatttcaagatatttagatccccaaagaaccgtgaaaatatattttat
aaagccatttacaaagaaactgaaaacaaagattacgaaatgatactaaagattataaat
gaaacaagaaaaagcattggaggtgtatcaaactcaacaattatatattgccctacaatc
caaacatccatagatttaaatcaatatcttcaagcaaataaaattttatcaaattgttat
cactctcaaatgtccgatcctcaaagagaacaagttttgaagcagtttttattcaataaa
accgaggtagtttgtgctacaattgcctttggtatgggtatcgataaacacgatattaga
gttatcatacactatggcccaagcaaaagtgtagaagaatattatcaagagagcggcaga
gcaggtcgtgacggtttgccatccttaagtttagtatttttcagtttacaagatttcacc
aaaggttcattgagaattaatttcggtggtaatcatcaaaccaaatcaaataagattgat
aaattaactcagctaaagaatattatggttaatcgtactgaatgcagaaggaaggccata
ctctctgtattcaacgaacaatacagtgtccctccaaatggatgtggtggctgtgataat
tgtacagaagaaaaagataccagtaaccttttagaattaactcacgagtctagaatacta
atcaactgtatttttgaagcaggtcaaagctgtggtatgaaaactataataaatatatta
cgtggttcaactagctcggatttagctcaaaaacacttaaaaaattcatattatggtaaa
ggcatttcatttagtcttaaattttggaaagaattagcaaatcaactaaaaacattggac
tacttgactgaaacaacatccaatgtttatacaattactaaattttcaaaaaaaggttgg
gaattatacaagtcaccagatcttaaagttttcattggttccaataaaattttaaaagat
gaatataaattaacaaatttttataaaaatcaactttcctcaaaaaaactttccacctca
atctcaatctcttcgactatatctccctcaaaaaataatattatttcaaataaatggagc
gtccttgccgcacctacctcaaattcaaatattcaaagcttatttcaaattctagtagaa
tatagaaaatcactatcggctttaacggaaataccagagtttctcctattctctgaaaaa
accctcagacatatagctgaaactagaccatcctcattagattcccttagacttattgaa
ggtttagaagaaaagaaaattaaagatcatggtaattcaattttattaaaagttaaagaa
ttttccaaacaaaaatcattaaatttagataatttcccaagcaataataataaaaataat
aataatagtaataataataataatgtaaataacaataataacaaaataacttctaccatc
tcacatatccccgaaccaccaaaatcacaaaaagataaaaataatatatccactattttc
aatattattaaaggttttaatacatctcctcaatcaaagcaaaaattagatgctaacgat
aacaacaataataataataacacaagtttccaatttaatgttagatctagtagtacagga
agtttaaatagtagcagtgatagtattaataacattagtaaatcagatagctcaaacaat
attttaggtgaaaagagaaagagtgatttaagtaatacaggtgataataaaagatttaaa
atctctgtcaaaaatttatcatttgctgaaatatataaccacaaaccatcactcactcca
ataaactatttcgatatcaaaaatcattttaaatcaattagagatcaatcatatagaaac
aacccaaaaagaataccacccaaacaataa
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