Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_20033
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Entry
DICPUDRAFT_20033 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_20033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_20033
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DICPUDRAFT_20033
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DICPUDRAFT_20033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
10509611
NCBI-ProteinID:
XP_003283707
JGI:
Dicpu1_20033
UniProt:
F0Z8G4
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
IKDVWSYNLDEEMEKIRNLVDDYNYIAMDTEFPGIVTRPVGNFRSTSDYHYQTLRLNVDQ
LKIIQLGLTFCDSEGNLAKPTSTWQFNFKFNLNEDMYAQDSIDLLSRSGIEFKKFEAHGI
DILDFGEQLMSSGIVLNDNIKWISFHSGYDFGYLLKSLTCTVLPLDEADFFSLARTYFPC
IYDIKYIMKSCKNLKGGLSELADDLDIKRIGPQHQAGSDSLLTCTTFFKMRKMYFENQLD
DSKYLGVLYGLSSFSQDGTPTNLNTTNNPNNQS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
attaaagatgtctggagttacaatctggatgaggagatggaaaagataaggaaccttgta
gatgactataactatatagcaatggatacagagtttcctggtattgtaacaagacctgtt
ggcaattttagaagtacatcagattaccattaccaaaccctaagattaaatgttgaccaa
cttaaaattattcaattgggtttaactttttgtgactcggaaggtaatttagcaaaacca
acaagtacatggcaatttaattttaaatttaatttaaatgaagatatgtatgctcaagat
tcaatcgatttattatcaagaagtggtatagagtttaaaaaatttgaagcccatggtatt
gatattttagattttggagagcaactaatgtcttcaggaattgttttaaacgataacatt
aaatggatatcttttcatagtggttatgattttggttatttattaaaatcattaacatgt
acagtattaccacttgacgaagcagatttcttctcgttagcaagaacatatttcccatgc
atttatgatattaaatatataatgaagagttgtaaaaatcttaaaggtggtttaagtgaa
ttggcagatgatttagatattaaaagaattggaccacagcatcaagcaggtagtgactca
ttattaacatgcacaactttctttaaaatgagaaagatgtattttgaaaatcaattggat
gactcaaaatatttaggtgttttatatggtctctcatcattttcacaagatggcacacca
acaaatcttaataccaccaacaatcctaataatcaaagc
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