Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_25293
Help
Entry
DICPUDRAFT_25293 CDS
T02090
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03013
Nucleocytoplasmic transport
dpp03015
mRNA surveillance pathway
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_25293
09122 Translation
03013 Nucleocytoplasmic transport
DICPUDRAFT_25293
03015 mRNA surveillance pathway
DICPUDRAFT_25293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_25293
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_25293
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICPUDRAFT_25293
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DICPUDRAFT_25293
Spliceosome [BR:
dpp03041
]
Complex C
Other components
EJC/TREX
DICPUDRAFT_25293
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DICPUDRAFT_25293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ATPD_C_fung
Motif
Other DBs
NCBI-GeneID:
10503557
NCBI-ProteinID:
XP_003283124
JGI:
Dicpu1_25293
UniProt:
F0Z6V0
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MAETNPEVDISELAEYEESDEEVQNDAGDAKKNISAKDTHVAMHSSGFREFLLKPELERV
IGDCGFEHPSEVQNECIPQAILGSDLICQAKSGMGKTAVFVISTLQQLDNNPSGVTTLVL
CHTRELAYQICDEYDRFTKYLPNIKTAVIYGGIPVQTHKDLLKEKKPNIVIGTPGRILQL
AKEGALSLKEIKQFVLDECDSLLESLDMRKDVQMIFKLIPPNKQVMMFSATLSDTVRPVC
KKFMSNPLEIYINDGSKLTLHGLQQYYVEIKEDQKNKKLIDLLDALDFNQAVIFVKSVPR
AAALNKILQDIGFPSICIHRDLSQPERIEQYRKFKNFESRIMVATNIFGRGIDIERVNVV
INYDMAESADTYLHRVGRAGRFGTKGLAISFVPSKDDEVLTQVQSRFVVQIKDLPATIES
SSYMSG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaaatccagaagttgatatcagtgaattagctgaatacgaagaaagtgat
gaagaagttcaaaacgatgccggtgatgccaaaaaaaatatttcagcaaaagatacccac
gttgctatgcacagtagtggtttccgtgaattcctcttaaaaccagaattagaaagagtt
attggtgattgtggttttgaacatccatcagaagtacaaaatgaatgtatcccacaagct
attttaggttccgatttaatttgccaagctaaatctggtatgggtaaaactgctgtcttt
gtcatttcaactttacaacaactcgataataacccatccggtgtcaccactttagtttta
tgtcacactagagaacttgcctatcaaatttgtgatgaatacgaccgtttcactaaatat
ttaccaaacatcaaaaccgctgttatctatggtggtatcccagtccaaactcataaagat
ttactcaaagaaaagaaaccaaatattgtcattggtactccaggtcgtattttacaacta
gccaaagaaggtgctctctcacttaaagaaattaaacaatttgtcctcgatgaatgcgac
agtttactcgaatcattagacatgagaaaagatgtacaaatgatcttcaaactcatccca
ccaaacaaacaagttatgatgttctctgctactctctctgatacagttcgtccagtttgc
aagaaattcatgagcaatccactcgaaatttacattaacgatggttccaaattaactctc
cacggtctccaacaatactacgtcgaaattaaagaagaccaaaagaacaagaaactcatt
gatcttttagatgctcttgactttaatcaagccgttatctttgttaaatcagttccacgt
gctgctgccctcaacaaaatccttcaagacattggtttcccatccatttgtattcataga
gatctctcacaaccagaacgtatcgaacaataccgtaaatttaaaaactttgaatcacgt
attatggtagccaccaacatttttggtcgtggtatcgatattgaacgtgttaatgtcgtt
attaactacgatatggctgaatcagctgatacttatcttcacagagtcggtcgtgctggt
cgtttcggtactaaaggtttagcaatttcatttgttccatccaaagatgatgaagttctc
actcaagttcaatcaagatttgttgttcaaattaaagatttaccagccacaatcgaaagc
tcatcatatatgagtggctag
DBGET
integrated database retrieval system
