Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_28208
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Entry
DICPUDRAFT_28208 CDS
T02090
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03030
DNA replication
dpp03410
Base excision repair
dpp03420
Nucleotide excision repair
dpp03430
Mismatch repair
dpp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DICPUDRAFT_28208
03410 Base excision repair
DICPUDRAFT_28208
03420 Nucleotide excision repair
DICPUDRAFT_28208
03430 Mismatch repair
DICPUDRAFT_28208
03440 Homologous recombination
DICPUDRAFT_28208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpp03032
]
DICPUDRAFT_28208
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_28208
Enzymes [BR:
dpp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DICPUDRAFT_28208
DNA replication proteins [BR:
dpp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
DICPUDRAFT_28208
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
DICPUDRAFT_28208
MMR (mismatch excision repair)
DNA polymerase delta complex
DICPUDRAFT_28208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
10506816
NCBI-ProteinID:
XP_003284787
JGI:
Dicpu1_28208
UniProt:
F0ZBG9
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MDLDIQDDGSKQITLWARNPIPSDFSPKKDSLIFQQLEVDYAEIKEPVPGMPGPSVGPLP
VVRLFGVTKNGNSVLCKVHGFLPYFFISCPPNFTQSDCKSFKKALNVNIKVEDIVISIRI
VQKKSIMGYNPNPLTDFIEITLILPKFVTRCRDILETGKHRFEIPGQPFRQYQTYESNIP
FALRFLIDKKIPGCSWIELPANKYQFSENQVSTCQIEVDISNKELLNYSDESFAPFRILS
FDIECAGRKGFFPEPEKDPVIQIANIVKNQGESEPFIKNIFTLKGCSSIVGAHVISHKCE
KDMLKEWRKFLIKVDPDIIIGYNIANFDLPYLISRARTLKIPEFALLSRIKTTISKIKST
HFSSSNLGTRESKEVSMPGRTQFDLMQAIQRDHKLSSYSLNNVSAHFLKEQKEDVHFSII
SDLQNGTDDDRRRLAVYCIKDAALPMKLLDKLMLLINYTEMARVTGVPLSYLLGRGEGVK
VLSQLYRKAMVEDFLIPTYKVTGKAGEKFKGAVVIEPKCAFYDTPIATLDFTSLYPSIMM
AHNLCYSTLLPAEEAKKLPADEYTVTPSGDHFILPHKKKGLLPRILEELLSARKNAKELL
KNEKDPFKKAVLDGRQLALKISANSVYGFTGARVGKLPCVEISRSVTSFGREMLDTTKKI
VEERYTIANGYNHDAVVIYGDTDSVMVKFGVPTVAEAMALGREASKEVTKHFIRPINLDF
EKVYYPYLLMAKKKYAGLFWTKPDIHDKMDVKGLETVRRDTCLLVRNVVSTILKKLLIEK
DIKQAEEYTKSVISDLLQNRLDLSMLVITKALSKSQYKGRVIHNELAQKMRARNPATAPN
LGDRVPYVVIQGLKGAPIYEKAEDPLYVLEHNILLDTQYYLDKQLKAPLLRIFKPLLPNP
EQIFAGEHTRTIAQSTLSSTNNPFFGTLEKKKVCMSCPNELTSEESTVCKNCKHKEGDLY
QTSLNNVTKLENKFAESWTQCQRCSGSLHQPVLCSNRDCPIFYMRTKVQIDLIEAKKTLN
RFNVEW
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgatattcaagatgatggatcaaagcaaattacattatgggcaagaaatcca
attccatcagatttttcgccaaaaaaagactcattaatatttcaacaattagaagtagat
tatgccgaaattaaagaaccagtaccaggtatgccaggtccctctgttggtccattacca
gtggtccgtttatttggtgttactaaaaacggtaatagtgtattgtgtaaagttcatggt
tttttaccatacttttttattagctgtccacctaattttacacaatccgattgtaaatct
tttaaaaaagctttaaatgtaaatattaaagttgaagatattgtcatctcaattagaatt
gtccaaaagaaatcaattatgggttataatccaaatcctttaacagactttattgagatt
acattaattctaccaaaattcgttacaagatgcagagatattctcgaaacaggtaaacat
cgttttgaaattccaggtcagccatttagacaatatcaaacctacgaatcaaatatacca
tttgctttaagatttttaattgacaaaaaaattccaggttgtagttggattgaattacca
gcaaataaatatcaattttcagaaaatcaagtctcaacatgtcaaattgaagttgatatc
tcaaataaggagttattaaattatagtgatgaatcatttgcaccatttagaattttatca
ttcgatattgaatgtgcaggtagaaaaggttttttcccagaaccagaaaaagatccagtc
attcaaattgcaaatattgtaaagaatcaaggtgaaagtgagccattcattaaaaatatt
tttacattaaaaggttgttcaagtattgtaggtgctcacgttatctcacataaatgcgaa
aaagatatgttaaaagagtggagaaaatttttaatcaaggtcgatccagatataatcatt
ggttacaatattgcaaatttcgatcttccatacttaattagtagagctagaacattaaag
atcccagagtttgcacttttaagtagaattaaaacaactatctccaaaatcaaatcaact
catttctctagcagcaacttgggtacccgtgaaagtaaagaagtatcaatgccaggtaga
actcaatttgatttaatgcaggccattcaaagagatcacaaattaagtagctattctctc
aataatgtatcagcacactttttaaaggaacaaaaagaagatgttcatttctccattatt
tcagatcttcaaaatggtaccgatgatgatcgtcgtcgtttagctgtatattgcattaaa
gatgctgctctcccaatgaaacttttagataaattaatgcttcttatcaactatactgaa
atggcacgtgttactggtgttccattatcttatcttttgggccgtggtgaaggtgttaaa
gttttatcacaattgtatagaaaagctatggtcgaagatttccttattccaacttataaa
gttacaggtaaagctggtgaaaaattcaaaggtgctgttgttattgaaccaaaatgtgca
ttctacgacactccaattgcaactcttgattttacatctctatatccatccattatgatg
gcccataatctttgttattcaactttattaccagcagaagaggctaaaaaacttcctgct
gatgaatatactgtcactccatcaggtgaccactttattcttcctcacaaaaagaaaggt
ttactccctagaattttagaagaacttttatctgcaagaaaaaatgctaaagaattatta
aaaaatgaaaaagatccattcaaaaaagcagttttagatggtagacaattagcacttaaa
atttctgcaaattctgtatatggttttactggtgcacgtgtaggcaaacttccatgtgtt
gaaatttcacgtagtgtaacttcatttggtagagaaatgcttgatacaactaaaaagatc
gttgaagagcgttataccatcgcaaatggttataaccatgatgctgttgtaatttatggt
gataccgattccgtaatggttaaatttggtgtaccaactgtagccgaagcaatggcatta
ggaagagaagcctcaaaagaagttaccaagcactttattcgtccaattaatttagatttc
gaaaaagtttattatccatatcttttaatggctaaaaagaagtatgctggtcttttctgg
acaaaaccagatatccacgataaaatggacgttaaaggtttggagactgtgcgtcgtgat
acttgtttattagtaagaaatgtagttagcaccatcttaaagaaacttttaatagaaaaa
gatatcaagcaagcagaagaatacaccaaaagtgttattagtgatcttttacaaaatcgt
ttagatctttcaatgttggttatcaccaaagctctttcaaaatctcaatataaaggtaga
gttattcacaacgaattagcccaaaagatgagagctagaaatcctgcaactgccccaaat
cttggtgatcgtgtcccatacgtagttattcaaggcttaaagggtgcaccaatttatgaa
aaagccgaagatccactttatgttttagaacacaacattcttttagatactcaatactat
ttagataaacaattaaaagctcctcttttacgtattttcaagccactcttaccaaatccc
gaacaaatttttgctggtgaacacactagaactattgctcaatcaaccctttcatcaacc
aacaatcctttctttggtactttagaaaagaaaaaagtctgtatgagttgtccaaacgaa
ttgaccagcgaagaatccacagtttgtaaaaattgtaaacataaagaaggtgatctctat
caaacctctttaaataatgtcaccaaattagaaaacaaatttgcagaatcttggactcaa
tgtcaacgttgttccggtagtcttcatcaacccgttttatgttcaaatcgtgattgtcca
attttttatatgagaactaaagttcaaatcgatttaattgaagcaaagaagactttaaat
agatttaatgtcgaatggtaa
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