Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_29826
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Entry
DICPUDRAFT_29826 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_29826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_29826
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DICPUDRAFT_29826
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
DICPUDRAFT_29826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PG_isomerase_N
DUF7386
Motif
Other DBs
NCBI-GeneID:
10499252
NCBI-ProteinID:
XP_003285741
JGI:
Dicpu1_29826
UniProt:
F0ZEA5
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MQKISPSEVTFIQQGVENNIRSDGRNRVDYRNFSLETGEIIHANGSARVKLSDTEVLVGV
KAEITHIQPKELTNTLQTFDTSKRLVFSVNCCPSASPEFEGKGSEFLNIELGKQLERLYK
FIFNKSNYHGNDNCLSIVSGKYYWTLYIDAIVLDSDGNLFDALSIATRAALYNTRLPRVK
AIQGEYEEITFEVSDDPEDTLSLSIENAPICVTLTKIGTQFVIDSTLQEELCMDARLTVG
INSHSNICSIQKGGIQGLDPATINQMINTSKVIGTKILNIMDKTLKENCI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatttcaccatcagaagttacatttatccaacaaggtgttgaaaataatatt
agatcagatggaagaaatcgtgtagattacagaaatttttcattagagacaggggaaatt
atacatgcaaatggatcagcaagagtaaaattatcagatacagaggttttagttggagtt
aaagcagagattacacatatacagcctaaagaattaacaaacactctacaaacttttgat
acatcaaagagattggtattcagtgtaaattgttgtccatcagcatctccagaatttgaa
ggtaaaggttcagaatttttaaatatagaattgggtaaacaattagaaagattatataaa
tttatatttaacaaatccaactatcatggtaatgataattgtttatcaattgtatctggt
aaatattattggactttgtatatagatgctatagttttggattccgatggtaatcttttt
gatgcattatccattgcaactagagcagcattatataatactagattaccaagagttaaa
gccattcaaggtgaatatgaggaaattacatttgaagtttcagatgatccagaagatact
cttagtttatcaatcgaaaatgcacccatctgtgtaacccttactaaaatcggtacccaa
tttgttatcgattcaacccttcaagaagaattatgtatggacgctcgtttaacagttggt
attaattctcattcaaatatttgtagtattcaaaaaggtggcattcaaggtttagaccca
gcaactattaatcaaatgattaatacctctaaagtaattggcaccaaaattttaaatatt
atggataaaacattaaaagaaaattgtatttaa
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