Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_32526
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Entry
DICPUDRAFT_32526 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_32526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_32526
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DICPUDRAFT_32526
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DICPUDRAFT_32526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF7803
Motif
Other DBs
NCBI-GeneID:
10500362
NCBI-ProteinID:
XP_003287477
JGI:
Dicpu1_32526
UniProt:
F0ZJ84
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MNTRKLQGEIDKTLKKAADGIIEFDSILKKVYSAISTNQKEKYESDLKKEIKKLQRYRDQ
IKVWIASNDVKNKSALLDSRKSIEEKMDDFFERDARGKGYSKDNLDAATKNELAKDHVRD
WGNKAISTLKSQMESFDSELESIPVRKRKTESTRVEALQKYTTYHRYHLRALEFLVRAMD
EDRISPDDIEKIKDSVECYIDSYEQEDTFEEPEEVYSNFNLKQTEMGDEDYEFSLDEDSD
DEEEEGYSDTSDNDNDIDDETNKQDSDNENASTTSTASSTATSSATATPSSTTTPATTPS
STTVPSTKSPTLNSQQRVGSPAPNQPPQQPQNKTLTQSPTFSSVTKSNIKNDPNTNKQPQ
PQPQPQSQSQPQPQPQPQPQSQPQSQPQPQSQPQTNAQSQFPSSIGNVPMAQRLMQHQQA
QQQAAAAAQQAAQQQAVNKNKQFNDVNDVQDQLSQLNINKQIVQPPTSVQDLDDSKNNET
FDNSSNIYPGSLAELSSATLSRINEGNYTQQQQVQQQQQQAQQQYLYQQQYQQQQQQQLS
PLQQQQAQQQQYQQQNQQAQQQYQQQMPHQAYPQHPSMSPPQPSLVSGQLGFEDAMMLTK
HMMDVSLNNIPEINDYERVSTYIPRNPKPVPPYYPQTPLAIFDSSNVFEKFDIDTLFFIF
YFKQGSYQQYQAAKELKKQGWRYHKKYLTWFRRHEEPKEITNEYEQGTYVYFDYETGWCF
GANSDNIPDFIKSSFINSSLDNATQWIWSNEETTDSRVNHLFNICDEQMNNLYECEMKFG
NNNPICEPKFNSYNKCVSKEICPKQFYLSQIFCFGNTDLDNGKIKIPESALNEINEKDKN
DLCKQFSKELTSCVNQSLSKIWSP
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaggaaattacaaggtgaaatcgataaaacattaaaaaaagcagcagatggc
attatagagtttgattctatattgaagaaagtttattcagctattagcaccaaccagaaa
gagaaatatgaaagcgatttaaagaaagaaattaaaaaacttcaaagatatagagatcaa
attaaagtttggatagcttcgaatgatgttaaaaataaatccgcattactagattctaga
aaatctatagaagaaaaaatggatgatttctttgaaagagatgcaagaggtaaaggttat
tcaaaagataatttagatgcagctacaaagaacgaattggcaaaagatcatgtacgtgat
tggggtaataaagcaatatcgacacttaaatcacaaatggaatcatttgatagcgaatta
gaatcgataccagttagaaaaagaaaaactgaatcaacacgtgtcgaagcattacaaaag
tataccacatatcatagatatcacttacgtgctctagaatttttagtgagagcgatggat
gaggatcgtatatccccagatgacattgaaaaaattaaagattcagtcgaatgctatata
gactcatacgaacaagaagatacctttgaagaaccagaagaagtttattcaaattttaat
ctcaaacaaactgaaatgggtgacgaagattatgaattctctttagatgaagattctgat
gatgaggaagaagagggttattctgatacatctgataatgataatgatattgacgatgaa
acaaataaacaagactctgataacgaaaatgcatcaacaacaagcacagcatcatcaact
gcaacctcatccgctaccgcaaccccatcttctactacaacacccgcaactaccccatct
tcaactaccgttccttcaactaaatcaccaacattaaattcacaacaaagagtaggatca
ccagccccaaatcaaccaccacaacaaccacaaaacaaaaccttgacccaatcaccaact
ttttcatctgtaactaaatcaaatattaaaaatgatcctaataccaataagcaaccacaa
ccacaaccacaaccacaatcacaatcacaaccacaaccacaaccacaaccacaaccacaa
tcgcaaccacaatcgcaaccacaaccacaatcacaaccacaaacaaacgcacaatcacaa
ttcccatcatcaattggaaatgtaccaatggcacaaagattgatgcaacatcaacaagct
caacaacaggccgccgctgcagcccaacaagcagcccaacaacaagccgttaataaaaat
aaacaatttaacgatgtcaatgatgttcaagatcaattatctcaattaaatattaataaa
caaatagtacaaccaccaacctcagtacaagatttggatgatagtaaaaataacgaaacc
tttgataattcttcaaatatttatccgggctcattagccgaattatcatctgctacatta
tcgagaattaatgagggtaactatactcaacaacaacaagttcaacaacaacaacaacaa
gcccaacaacaatatctttatcaacaacaataccaacaacaacaacaacaacaattgtca
cctcttcaacaacaacaggctcaacaacaacaatatcaacaacaaaatcaacaagctcag
caacaatatcaacaacaaatgccacatcaagcatatccacaacatccatcaatgtcacca
ccacaaccatctcttgtatcgggtcaactaggatttgaggatgcaatgatgttaaccaaa
catatgatggatgttagtttaaataatataccagaaattaatgattatgaacgtgtttca
acttatataccacgcaatccaaaaccagtaccaccatattatccacaaacaccacttgca
atttttgactcttcaaatgtatttgaaaaattcgatatcgatacattatttttcatattt
tactttaaacaaggctcataccaacaatatcaagctgccaaagaactcaaaaaacaaggt
tggagataccacaagaaatatttaacttggtttagaagacatgaagaaccaaaagaaatt
acaaatgaatatgaacaaggtacatatgtttatttcgattatgaaactggttggtgtttt
ggtgctaatagtgataacataccagatttcattaaatcatcatttataaatagtagtttg
gataacgcaacccaatggatttggtcaaatgaagaaactacagactctagagtaaatcat
ttatttaatatttgtgatgagcaaatgaataatctttacgaatgtgagatgaaatttggt
aataataatccaatttgcgaaccaaaattcaattcttacaataaatgtgtatcaaaagag
atttgtccaaaacaattttatctaagtcagattttttgttttggtaataccgatttagat
aatggcaaaattaaaatcccagaatcagctttaaatgaaattaatgaaaaagataaaaat
gatttatgcaaacaattttcaaaagaattaacatcatgtgtaaatcaatcactttcaaaa
atctggtcaccctaa
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