Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_33784
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Entry
DICPUDRAFT_33784 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03013
Nucleocytoplasmic transport
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_33784
09122 Translation
03013 Nucleocytoplasmic transport
DICPUDRAFT_33784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_33784
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_33784
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DICPUDRAFT_33784
Spliceosome [BR:
dpp03041
]
Complex C
Other components
EJC/TREX
DICPUDRAFT_33784
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DICPUDRAFT_33784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
10501689
NCBI-ProteinID:
XP_003288271
JGI:
Dicpu1_33784
UniProt:
F0ZLH7
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
SIKNFDTVLSDVFWLVGTEIETLGSEDNIQKPYLITLVKESVEQGVVPANMLKERLEMDI
LEASGIIKSQKKFLNRLIRVNTKDVYTQVKFNLFKEESEGFSKVLSELNKGPLLNERTVD
ATIQNIKALIGYFNLDPNRVLDIVLDSFEQNFQNSECFLKILKNFKVSAIPQLIGFKYQF
YQQQQLSQIQQIKQQLEQQAAAAVAAAAADKSETTIKSSSSTSTSNTVQESPIIQTTTNP
NDIITPKSLYNVTALLLKEKIFNLESIYPHLAPSDEEIKNQFQHRREEIIASSRNSTSLV
SNDDTQQSANASKKEQAASQAVAAVAAANELVQENQKFNLLVALLETHEVHCTGQLLYNL
SSSQIDVASNTQVSQALISRLSQIIEPLYNPISFTTLRESCTTTGSSTIITNFDLQAFID
SSEMIFFLLGHLGVFLSQDIKLFLKICRIFERVVVKVLPLVDQQQPNSKINYVQLKSDLE
SILQSVLLPTFSMTPENPCVASEIWDILKHFPYQKRYQIYYEWKEQYKKVLSLICTKTDV
IIETKKIMRRLSKDNYKQLGKSIGKISHAHPAIVFEVILSQVELFDSLVIPLVDGLRYIS
TLSADVLSFVLLERLCIKRDRLKPDGTNIASWFQALSLFIGLYYKKYPLTELEGILQYTV
NQLKDNNSLDLIILKELLLKMGVTEIVEEAPEAQMEAQAGGENLKQETTTVQLQGVRNSK
KSINKLKEALVNSKLAFPLFVLIAKQCHNIIHDSNEHQHIKLINNLYDKCQETLLQYTEF
LSSHSTPEKYSEYFKEDFNSLVNTYHLEPEAAFHIYRPPSSKNITSICKPIYSDDIWKTI
SPELYSTFWSHSLYDIYVPKTLYETEITKLKKQISELEYQYVQSGSKDVKKKKEKERVQT
NLEKLQKEFNTQNQNHQKVLESIQSQKDKFFQESKDTNIKKESLIKFLQYCVFPRATFTS
TDAIYCAKFVQILHTINTPNFGLMNYYNELVSMITFTVFSSTDNEANRFGRFLSESFGVL
NKWKQSESIYDRECGKIIKLNYENFVKFFTKCHKSISDSFALCLNSGEHMVIRNGLLVLT
KLVHYFPAHKSNYEYIESLVSQLKQREDLKTLAIRYNSLLDKEKPRMIDDIKPKKTNTTT
TNTSQSNTNSPQSSSKDVTMKESKETRDSKDVAMKESKETRDSKDVIMKDDTTNKSERDK
QREERDKERDSTKSSREIEREQREKEKDKQQREEKEQREKEKEQREKEKEQREKEKEQRE
KERDLRDKEQREKDVREKDREQREKESQQRDKDRDRERDQHKDQKERDKQREDRDKEKER
DQQKEKEIQRLERERNDRDRIERDRSDRDSSQPRIERDVSRDNRDRENYGSRGNNDNNSN
NNRDYNRNENRGEGRDYNRNENRGDFNRDIRDRSKERERESTRTENRSDNRNDFRDNRND
RSDRNDRNDRGESKDGRNELRDSGRNDRGERNDLREGRNERDRSDKDIKNERSERNERNE
SRAERDNKSDNKDKNDRDIKNDRDIKNDRNERSERNERNDRNERNDRNDRGDRNESKERN
KNNETPQQSPPQKSPPHRSNNRNENTSPTLSSNVTSPAIPPPSEEEKFKRDKKKREEKFE
SLKKSNSSSNISGESQSSTPPSTSSNQIRSRSNSKDRSQQSPPHQQQQQAPPRDKEEKDE
NEKNQKIKELREKAALSKKDNTPSQQNDKSNNNNNNDQKKREREKEIEQEEYKRKKTLNR
KPNQLQSPPLQQQQYHGGYGHQQHGHGGHQQHHQGGHGGGYGGRNDKDRNYNNYNNRGYK
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
tcaattaaaaatttcgatacagttttatcagatgttttttggttggttggcacagaaatt
gaaaccttgggttcagaagataacatccaaaaaccatatttgattacattggttaaagaa
agtgttgaacaaggagtagtaccagcaaatatgttgaaggaaagattggaaatggatata
ttggaggcttcaggtataattaaaagtcaaaaaaaatttttaaatagacttatcagagta
aatacaaaggatgtttatacacaagtaaagtttaatttatttaaagaagaaagtgaaggt
ttttcgaaagtgttatcagagttaaacaaaggtccattattaaatgaacgtacagtagac
gcaaccatccaaaatattaaagcattgattggttatttcaatttggatccaaatagagtt
ttagatatagttttagatagctttgaacaaaattttcaaaattccgaatgttttttaaag
attttaaagaattttaaagtttctgcaattccgcaattaattggttttaagtaccaattt
tatcaacaacaacaactatctcaaattcaacaaataaagcaacaattagagcagcaagct
gctgctgctgttgccgctgctgccgccgataaaagtgaaactactataaaatcatcatcc
tcaacctcaacatccaatacagttcaagaatcacctattatacaaaccacaaccaaccca
aatgatataataacaccaaaatcgctatacaacgtcacagcattattgttaaaagaaaaa
atatttaatttagagtcaatttatccacatttggcaccaagcgatgaagagattaaaaac
caatttcaacatagaagagaggaaattattgcttcctctagaaattccacctcattggta
tcaaatgatgatactcaacaaagtgccaatgctagtaaaaaggaacaagcagcatcacag
gctgtcgctgctgttgcagctgcaaatgaattagttcaagagaaccaaaaattcaattta
ttggttgcactattagagacccacgaagtccattgtacaggccaactactttataattta
tcatcctctcaaattgatgtagcatcaaatacacaagtatctcaagctttaatttcacgt
ttgtcacaaattatcgaaccactttataatccaatttcattcactaccttaagagaatca
tgcactacaactggctcaagtactattattaccaatttcgatttacaggcatttatagat
tcatcagaaatgatattctttttacttggccacttaggagttttcctatctcaagatatc
aaattatttttaaaaatttgcagaatttttgaaagggtcgtagttaaagttttaccattg
gtagaccaacaacaaccaaactcgaaaataaattacgttcaattaaagagtgaccttgaa
agtatcttacagtccgttcttttaccaaccttttcaatgacaccagaaaatccttgtgtt
gccagtgagatttgggatatcttaaaacacttcccatatcaaaagagataccaaatttat
tacgaatggaaagaacaatacaaaaaagtcctctctttaatatgcaccaaaacagacgtt
atcattgaaacaaaaaagattatgcgtcgtttatcaaaagataattacaaacaattaggc
aaatccattggtaaaattagtcatgcccacccagccatcgtatttgaagtcattttatct
caagtagaactttttgactcccttgttattccattggtcgacggtcttagatatatttca
acattatctgcggacgtactcagttttgtacttttagaaagactttgtataaagagagat
agactaaaaccggatggtacaaatattgcatcttggttccaagcactctcactttttatt
ggtttatactataaaaagtaccctcttaccgaattggaaggtattttacaatataccgtt
aatcaattaaaagataacaattctctcgatttaattattcttaaagagttgttattaaaa
atgggtgtcacagagattgtcgaagaagctcctgaagctcaaatggaggctcaggccggt
ggtgaaaatttaaaacaagaaactaccacagttcaactacagggtgttagaaattcaaag
aagtcgataaacaaattaaaagaagcacttgttaatagtaaactagcctttccacttttc
gttttaattgctaaacaatgccacaatatcattcatgattcaaatgaacatcaacatatc
aaacttatcaataatctttatgacaaatgtcaagaaactttacttcaatatacagagttt
ttatcatcccattcaacacccgaaaaatattcagaatattttaaagaagatttcaatagt
ctagtaaatacatatcatttggagccagaagctgcttttcatatttataggccaccatct
tcaaaaaacattacctcaatttgtaaaccaatttattccgatgatatttggaaaaccatt
agcccagagttatacagtactttttggtcccattcattatatgatatttacgtaccaaaa
acattatatgaaactgaaataacaaagctcaaaaaacaaattagtgaattagaatatcaa
tatgtacaaagtggtagtaaagatgtaaagaaaaagaaagaaaaagaaagagttcaaaca
aatcttgaaaaattacaaaaagaattcaatactcaaaatcaaaaccatcaaaaggtatta
gaatcaattcaatctcaaaaagataaattcttccaagaaagtaaagatacaaatataaag
aaagaatcattaattaaattccttcaatactgcgtttttccaagagcaacctttacctca
accgatgccatctactgtgccaaatttgtacaaatattacataccattaatacaccaaac
tttggtttaatgaactattacaatgaattagttagtatgattacctttacagttttttca
agtacagataacgaggccaatagatttggaagatttttaagcgaatcatttggtgtatta
aataaatggaaacaatcagaatctatttatgatagagaatgtggcaaaattatcaaatta
aattatgaaaatttcgtcaaatttttcacaaagtgtcataaatcgattagtgattcgttt
gctctctgtttaaattcaggtgaacatatggttattagaaatggtctattggtattaact
aaattggtacactatttcccagctcataaatcaaactatgaatatatcgagtcattggta
tcacaattaaaacaaagagaagatttaaaaaccttagcaatcagatacaactctctatta
gataaagaaaaaccaagaatgattgatgatatcaaaccaaaaaaaacaaatacaaccact
acaaacacctctcaatcaaacacaaactctccacaatcctcatccaaagatgttactatg
aaagaatcaaaagaaactagagactccaaagatgttgctatgaaagaatcaaaagaaact
agagactccaaagatgttattatgaaagatgatacaaccaataaatctgaaagggataaa
caaagagaagaacgtgataaagaaagagatagcaccaaatcatcaagagaaattgaaaga
gaacaacgtgaaaaggaaaaagataagcaacaaagagaggaaaaagaacaacgtgaaaaa
gaaaaggaacaacgtgaaaaagaaaaggaacaacgcgaaaaagaaaaagaacaacgtgaa
aaagaaagagatttaagagataaggaacaacgtgaaaaagatgttcgtgaaaaagatcgt
gaacaaagagaaaaagagtcccaacaacgtgataaggatcgtgatagagaaagagatcaa
cacaaagatcaaaaagaaagagataagcaaagagaagaccgtgataaagaaaaagaaagg
gaccaacaaaaggaaaaagaaattcaacgattagaaagagagcgtaatgatagagaccgt
atcgaaagagatcgtagtgacagagattcatcacaacctcgtattgaaagagatgtcagt
agagataatagagatagagaaaattatggaagtagaggtaacaacgataataatagtaat
aacaacagagactataatagaaatgaaaatagaggtgaaggtagagattataatagaaat
gaaaatagaggtgacttcaacagagatataagagataggagcaaagaaagagaaagagaa
agtaccaggaccgaaaatagaagtgataatagaaatgattttagagacaatagaaatgat
agaagtgatagaaatgacagaaatgatagaggtgaaagcaaagatggaagaaatgagctt
agagatagcggcagaaatgatagaggcgaaagaaatgatctaagagaaggtagaaatgaa
agagatagaagtgataaagacattaaaaacgaaagaagcgaaagaaatgaaagaaatgaa
agtagagctgaaagagataataagagtgacaataaagataaaaatgatagagatatcaag
aatgatagagatatcaagaatgatagaaatgaaagaagtgaaagaaatgaaagaaacgat
agaaatgaaagaaatgatagaaacgatagaggtgatagaaatgaaagcaaagaaagaaac
aaaaataatgaaacaccacaacaatcaccaccacaaaaatcaccaccacacagatcaaac
aatcgtaatgaaaacacttcaccaaccttatcatccaatgtaacttctcctgctatacca
ccaccatcagaagaggaaaaatttaaaagagataaaaaaaagagagaagagaaatttgaa
tcattaaagaaaagcaatagtagcagtaatataagtggtgaaagtcaatcatcaacacca
ccatcaacatcatcaaatcagattagaagcagatccaatagcaaagatagatcacaacaa
tcacctcctcatcaacaacaacaacaagctccaccacgtgataaagaggaaaaagacgaa
aatgaaaaaaatcaaaaaatcaaagaattgagagaaaaagcggctcttagtaaaaaagat
aatacaccttcacaacaaaatgataaatcaaataataacaataataatgatcaaaagaaa
agggaaagagaaaaagaaattgaacaagaagagtataaaagaaagaaaacccttaatcgt
aagcccaatcaattacaatcaccaccactacaacaacagcaatatcatggtggctatggt
caccaacaacacggtcatggcggtcaccaacaacatcatcaaggcggccatggaggtgga
tatggtggtagaaacgataaagatagaaactataataactacaacaatagaggttataaa
taa
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integrated database retrieval system
