Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_33962
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Entry
DICPUDRAFT_33962 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_33962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_33962
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DICPUDRAFT_33962
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
DICPUDRAFT_33962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
CHASE5
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
10501803
NCBI-ProteinID:
XP_003288385
JGI:
Dicpu1_33962
UniProt:
F0ZLU9
LinkDB
All DBs
Position
Unknown
AA seq
157 aa
AA seq
DB search
MTSNVITPGQRLAKDSEYISSEGTYTHKGYIYSSVLGFQHIIKKNLNKPTSEEINNSNNS
NVNNSDDRDFIVVLKEKEPSVVPEIGSIVTVQVLRINPKLASVAILCVGTKALKETFNGI
IRIQDVRATEIDKVEIYKSFRPGDIVLAQIVNISNIL
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaaatgttataacaccaggacaaagattagcaaaagatagcgaatatatatca
tcagaaggaacatatacacataaaggttatatatattcatctgttttaggatttcagcat
ataatcaaaaaaaatttaaataaaccaacatcagaagaaattaataatagtaataatagt
aatgtaaataatagcgatgatagagattttattgtagttttaaaagaaaaagaaccatca
gttgtaccagaaataggcagtatagttactgtccaagtacttcgtattaatccaaagtta
gcaagtgttgcaattctttgtgttggtaccaaagctttaaaagaaacttttaatggaatt
attagaattcaagatgttcgtgctactgagattgataaagtagaaatttataaatcattc
agaccaggcgatattgttttagctcaaattgtaaatatatcaaatattttataa
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