Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_38798
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Entry
DICPUDRAFT_38798 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_38798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_38798
03009 Ribosome biogenesis [BR:
dpp03009
]
DICPUDRAFT_38798
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICPUDRAFT_38798
Spliceosome [BR:
dpp03041
]
Complex A
U1 snRNP components
U1 related factors
DICPUDRAFT_38798
Complex B
DICPUDRAFT_38798
Ribosome biogenesis [BR:
dpp03009
]
Eukaryotic type
Pre-60S particles
Helicases
DICPUDRAFT_38798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
10507508
NCBI-ProteinID:
XP_003291328
JGI:
Dicpu1_38798
UniProt:
F0ZV75
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MFKQSKFSREKLNKENNKNNYNNNYNNNNKRNKNYNNELENENDYKIFNEDDDGEGLSKK
VLFEQDDLAYKKKQELRKQRQDSNLVKFNDNNSKNHHQQHNKEEEETAPIEDFNVNLKPI
DFSNLLPFKKQFLTNLQQPNNNNNNNEIEYIKETTEFIIEEESNDQDNENNNNNNKNNSD
KIEYFPKNIKIPIATTGDNSFLPGQLKLFFKKTEFKEPTTFQKYAWPAILCGNDMIGTSL
PGSGKTLGYLAPMIPHCLARMNRSQQQKQQFKDPYQEKKQKNSDLLVLVLVPTRELGLQV
FNNFKLINQLFGIKALAIYGGIPKPLQIEQLQREKPQILISTPGRLIEMIDLGHVNLSTI
TMLVLDEADKMLSKGLLPQLKQLRTQIRPDSQNILLSATFPESMKEVAKDWIKDPSIRLR
IGSSELPKLNHIEQTCQLMAHHKRPRALVKLLTENKEIKSNKKTIIFFNKIKELKRISIM
LLKSNIKHDTIFGNIDQEKREKLINKFSSSRTTLLLSTDIVGRGIHIDDIHYVINYDFPR
NLEQYCHRVGRAGRTDKVQDPKAFSFLTTSDGYLISAFVDFLKDQDQALSVPFLKQCNEK
FGTSFEFQLSKRKIKEISKKKEFSEEEKLLKKYDKLTKNKKYNDSDDKDKKIKSNKKDSD
SDSDSSSSSSSSEEDSNSDSNKKNKNKKIKRS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacaaagtaaatttagtagagaaaaattaaataaagaaaataataaaaataac
tataataataattataataataataataaaagaaataaaaactataataatgaattagaa
aatgaaaatgattataaaatatttaatgaagacgatgatggtgaaggattaagtaaaaag
gttttgtttgaacaagatgatttagcatacaagaaaaagcaagagttaagaaaacagaga
caggattcaaatctagtaaagtttaatgacaacaattcaaagaatcatcatcaacaacat
aataaagaagaggaagaaactgcaccaattgaagattttaatgtcaatttaaaaccaatc
gatttttcaaatttattaccattcaaaaaacaatttttaacaaatctacaacaaccaaat
aataataataataataatgaaatagaatatattaaagaaactacagaatttattatagaa
gaagaatcaaatgatcaagataatgaaaacaacaataataataataaaaataatagcgat
aaaattgaatattttccaaaaaatattaaaataccaattgcaactacaggtgataatagt
tttttaccaggtcaattaaaattgttttttaagaaaactgaatttaaagaaccaacaaca
tttcaaaaatatgcatggcctgcaatattatgcggtaatgatatgattggtacaagtttg
ccagggtcaggtaaaacattaggttatttagcaccaatgattccacattgtttagcaaga
atgaatagatctcaacaacagaaacaacaatttaaagatccatatcaagagaaaaagcaa
aagaattcagatttattggttttagtattggtaccaactagagaattaggtttacaagtt
tttaataattttaaattaatcaatcagttgtttggtatcaaggcattagcaatttacggt
ggtatacccaaaccacttcaaatcgaacaacttcaacgtgaaaaaccacaaattttaatt
tcaacacctggtcgtttaatcgaaatgatcgatttgggacatgttaatctttcaactatt
acaatgttggttttggatgaggctgataaaatgctttcaaaaggtttattaccacaatta
aaacaactccgtactcaaattagaccagattctcaaaatattttactctctgctactttc
ccagaatctatgaaagaggttgctaaagattggattaaagatccatcgattcgtttaaga
ataggttcatcagaattaccaaaactcaatcatatagaacaaacatgtcaattaatggct
caccacaaaagaccacgtgctttagtcaagcttttaacagaaaacaaagaaatcaaaagc
aacaaaaaaacaatcatctttttcaataagatcaaagagttaaaaagaatttcaattatg
cttttaaaatcaaatattaaacatgatacaattttcggtaacattgatcaagaaaaaaga
gaaaaattaatcaataaattttcaagttcaagaactaccttattgctttcaactgatatc
gttggtcgtggaattcacattgatgatattcattatgttatcaattatgatttcccaaga
aatctcgaacaatattgtcatagagtaggtcgtgctggtagaactgataaagtacaagat
ccaaaagccttcagtttcctcacaacaagtgatggttatttaatttcagcttttgtcgat
ttcttaaaagatcaagatcaagcactatctgttccattcttaaaacaatgtaatgaaaaa
tttggaacaagtttcgaatttcaattatcaaaaagaaaaattaaagaaatatcaaagaaa
aaagaattttcggaagaggaaaagttattaaagaaatatgataaattaacaaaaaataaa
aaatataatgatagcgatgataaagataaaaaaataaaatcaaataaaaaagatagtgat
agtgatagtgacagtagcagcagtagcagcagtagtgaagaagatagcaacagtgatagc
aataaaaaaaataaaaataaaaaaataaaaagatcataa
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