Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_47799
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Entry
DICPUDRAFT_47799 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_47799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_47799
03009 Ribosome biogenesis [BR:
dpp03009
]
DICPUDRAFT_47799
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICPUDRAFT_47799
Spliceosome [BR:
dpp03041
]
Complex A
U1 snRNP components
U1 related factors
DICPUDRAFT_47799
Complex B
DICPUDRAFT_47799
Ribosome biogenesis [BR:
dpp03009
]
Eukaryotic type
Pre-60S particles
Helicases
DICPUDRAFT_47799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SR-25
Motif
Other DBs
NCBI-GeneID:
10501656
NCBI-ProteinID:
XP_003288226
JGI:
Dicpu1_47799
UniProt:
F0ZLD7
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MPSVKNYNKRKTEDDDLEVEVEQSNSKKLKITKRDESSDSDSSSSDSDSEVESKSKQLSK
DKKEDKKEDKKEDKKEEIKPTNEILSPDEWRSKNNVQIEGKFQPDPFQKFTDYEFPRMFQ
HIFQSFTSPTVIQGQSWPIILGGHDLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGAT
PLILVMAPTRELAQQIEDVCKSSVRGTSIRQLCAYGGLGKLDQCRILRNGVDIIIGTPGR
LNDLLRKHHLSSVQYLVLDEADRMLDMGFLPQIETLIDQIPKERQTLMFSATWPKEVKQL
ASKFLRDPIKITVGSQELTGSINVTQHITNIDELADIQVDDLIFDEINKILTADRSNLVI
VFCNEKYKCDDFQHYLSASKNEKSIVLHSGKDQRQREQGLRLFREKRIRILIATDVAARG
LDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAGKTGEAWSYVTTQTPGLRDLVKILQRTNQ
TIPDFLQRFAVHSRPTQSRYSNNGGGGRGGRGGRGGGRSWGNRDNNGGGRSWGNRDNNGG
GNGGNGGSWGNRDNNGGGKSWGNRDNNGGGNGGNGGSWGNRDNNGGGNRSWGNRDNNRGG
YNNNNSNSNGSKGDW
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagtcaaaaattataataaaagaaaaaccgaagatgatgatttagaagtcgaa
gttgaacaatcaaattcaaaaaaattaaaaattactaaaagagatgaaagttcagattca
gattcctcatcatcagactcagattccgaagttgaatcaaaatccaaacaattatcaaaa
gataaaaaagaagataaaaaggaagataaaaaagaagataaaaaagaagaaattaaacca
accaacgaaattttatcaccagatgaatggagaagtaaaaataatgttcaaattgaaggt
aaattccaaccagatccattccaaaagtttacagattatgaattcccaagaatgttccaa
catattttccaatcatttacatcaccaacagttattcaaggtcaaagttggccaattatt
ttaggtggtcacgatttagttggtttagcagctacaggttcaggaaaaacattagctttt
cttttaccagcactcttaaagattatttcactcccaaagagaccatcctatggtgccact
ccactcattttagttatggcaccaactagagaacttgctcaacaaattgaagacgtctgt
aaatcatcagttcgtggtacatccattcgtcaattatgtgcttatggtggtttaggtaaa
ctcgatcaatgtagaatcttacgtaatggtgtcgatattattattggtactccaggtcgt
ttaaatgatttacttagaaaacaccatttatcaagtgttcaatatttagttttagatgaa
gctgatcgtatgttagatatgggtttccttccacaaattgaaacactcattgatcaaatc
ccaaaagaacgtcaaactttaatgttttcagccacctggccaaaagaagtcaaacaactt
gcttccaaattccttagagatccaattaaaattactgttggttcacaagaattaactggt
tccattaatgttacccaacacattacaaacattgacgagttagccgatattcaagttgat
gatttaattttcgacgaaattaataagattcttacagccgatcgtagtaatttagtcatt
gtattctgtaacgaaaaatataaatgtgatgatttccaacattatttatctgcatctaaa
aacgaaaaatctattgttttacacagtggtaaagatcaacgtcaacgtgaacaaggtctt
cgtttattccgtgaaaagcgtatccgtattttaattgccactgatgttgctgctcgtggt
ctcgatatcccaagtgttaaagccgttttcaattatcgtctcccaggtaacattgaagat
tacgttcatcgtattggtagaactggtagagccggtaaaactggtgaagcttggagttat
gtcactactcaaaccccaggtcttagagatttagttaaaattttacaaagaaccaatcaa
accattccagatttccttcaaagattcgcagtacactccagaccaactcaatcaagatat
agcaataatggtggtggtggtcgtggtggtagaggcggtcgtggtggtggtagatcatgg
ggtaacagagataataatggcggtggtagatcatggggtaacagagataacaacggtggt
ggtaacggtggtaatggcggctcatggggcaacagagataacaatggcggcggtaaatca
tggggtaacagagataacaacggtggtggtaatggtggtaatggcggctcatggggcaac
agagataataatggtggtggtaatagatcatggggaaatagagataataatagaggcggt
tataataataataatagtaatagtaatggaagtaaaggagattggtaa
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integrated database retrieval system
