Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_50444
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Entry
DICPUDRAFT_50444 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DICPUDRAFT_50444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_50444
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DICPUDRAFT_50444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
DUF7778
DUF6271
AAA_27
PB1
Motif
Other DBs
NCBI-GeneID:
10508174
NCBI-ProteinID:
XP_003292459
JGI:
Dicpu1_50444
UniProt:
F0ZYF7
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MSDNEQEETTQVVLKEDKGFVSFFQGLDLTDKDTIRLFDRKGYYSIHGDDAVFVALMHFK
SKKSLKYWGTANEMPKKKIKLDSSSSPPPSNEDTNLGLACLTIRQGFEYEQIIKELFEEK
KKIEIWAAKPNRINQWELSKKGSRGNTQQFEDVLFNYTENSVMMALKVTREKGSIVFGIA
FGDATFKTLGVSEFMDNDNLSNLSSFIMQMSIKECLLYSDPKNYDYAKVKEKLAEADIPF
TEVPKADFSSKNAEQDLTRLLGSVKNNLLDLEKENAIQSASCLIKHLDLLSNPNYFGKFK
LEKFDLNKYMKLDSASFRGLHIIDLKEHNSSGLPNSSATSTKDQSLYNLLNQCNTPMGSR
LLLQWVKQPLLDTEEIEMRLNFVETFFNDIELRQSLRSNDLKKIGDLDRLSKKLHGQKAS
LEDCVNLYGIVNRLPVVLSTLNGHSGVHQEMLKANFIDSLESIINDFQKFCAMVEKTIDL
DLANEKHEYVIRSSFDEALAEIQKLKDKTSQKIEGFRIKTADKLDLDESKVKLHYSEKDG
YLLRISRKDEVKLRDKKEFIIYATQKDGVRFSIKEINNLNETYKKLSAEYANKQDGLAKR
TLQIAASFVPLIEDLSSLIATLDVFVTMAHISSIAPTPFVRPEIHPLGTGNTVIFGGRHP
CVETQDGVSFIANDIELIREESQFQIITGPNMGGKSTFIRQVGLIVLMAQIGCFVPAQKA
IVSVVDCILSRVGAGDSQLRGVSTFMAEMLETSYILKVATKNSLIIIDELGRGTSTYDGF
GLAWGIAEYICNQIGGFCLFATHFHELTILADIIPVVKNLHVSASTENNTFTLLYKVESG
ACDQSFGIHVAVLADFPQQVIETAKLKAKELESFESNTLKQNHNSFLEEFKEIDFNTQNT
TESYEIVKSLLSKYSIDIE
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataacgaacaagaagaaacaacacaagttgttttaaaggaggataaaggattt
gtatcattttttcaaggtttggatttaacagataaagatacaatcagattatttgataga
aagggatattattcaattcatggcgatgatgcagtatttgttgcattaatgcattttaaa
agtaaaaagtcattaaaatattggggtacagcaaatgaaatgccaaaaaagaaaattaaa
ttagacagttcatcatcaccaccaccttcaaatgaggatacaaatttaggattggcatgt
ttaacaattagacagggttttgaatacgaacagattattaaagagttatttgaagaaaaa
aagaaaattgaaatttgggcagctaaaccaaatagaattaatcaatgggagttatcaaag
aaaggctcaagaggaaatactcaacaatttgaggatgttttatttaattatacagagaat
tcagtaatgatggcattaaaagttacacgtgagaaaggatcaattgtctttggtattgca
tttggggatgccacattcaagaccctgggcgtttcagagtttatggacaatgataattta
tcaaatctcagtagttttataatgcaaatgagtatcaaagagtgtcttttatatagcgat
ccaaagaactatgattatgcaaaagtaaaagaaaagttagccgaggctgatattccattt
accgaggttccaaaagccgatttcagctcaaagaatgcagaacaggatttaacaagatta
ttgggttcggttaaaaataatttattagacttggaaaaagaaaatgcaattcaatctgca
agttgtttaattaagcatttagatttattatcaaacccaaattattttggtaaatttaaa
ttagaaaagtttgatttaaataaatatatgaaattagattcagcatcattcagaggttta
catattattgacttaaaggaacacaattcatcgggattaccaaactcatcagcaacatca
accaaagatcaatcattatataatttattaaatcaatgcaacacacctatgggatcaaga
ttacttttacaatgggtcaagcaacctttattagatacagaggaaattgaaatgagacta
aattttgttgaaacctttttcaatgacattgaattaagacaatcacttcgttcaaatgac
ttaaagaaaattggtgatttagatcgtctttcaaagaaattacatggtcaaaaagcttca
ttggaagattgtgttaatctttatggcattgttaatcgtttaccagttgttttatcaaca
ttaaatggtcatagtggtgtacatcaagagatgctcaaagcaaatttcatcgacagttta
gaatcaattattaacgatttccaaaagttttgtgctatggtcgaaaaaactattgatttg
gatttagccaatgaaaaacacgaatatgttatccgttcaagttttgatgaagctcttgcc
gaaattcaaaaacttaaagataaaacatcccaaaagatcgaaggattccgtataaagact
gcagataagttggatttggatgaatcaaaagtaaaattacattatagcgaaaaagatggt
taccttttaagaatctctagaaaagatgaggtcaaattaagagataaaaaagagtttata
atttatgctacacaaaaggatggtgttagattttcaattaaggagattaataacctcaat
gagacatacaaaaaattatctgcagagtatgcaaataaacaagatggccttgctaaaaga
acccttcaaattgccgcctcgtttgttccattaatcgaagatcttagttcattaatagca
actttagatgtttttgtaaccatggcccatatatcatcaattgcaccaactcctttcgtt
agaccagagatccatccacttggtactggtaacactgttatttttggtggtcgtcatcct
tgtgttgaaactcaagatggtgttagttttattgcaaatgatatcgaattgattcgtgag
gaatctcaattccaaattattacaggtccaaatatgggtggtaaaagtacatttattcgt
caagttggtttaattgttttaatggcccaaataggttgttttgttccagctcaaaaagct
attgtttcagttgttgattgtattttatcaagagtaggtgccggtgatagtcaacttcgt
ggtgtttctacttttatggcagagatgttggagacttcatatattttaaaggttgccacc
aagaactcattaattattattgatgaacttggtagaggtacttccacatacgatggtttt
ggtttggcttggggtatcgccgaatatatttgtaatcaaatcggtggtttttgtttattt
gcaacccatttccatgagttaacaattttggcagatatcatccctgttgttaaaaattta
catgtatcggcaagtactgaaaataatacttttactttgttgtataaagtcgaatctggt
gcctgtgatcaaagttttggtatccatgttgccgttttagctgatttcccacaacaagtt
attgaaactgcaaaattaaaagctaaagaattagaatcatttgaatcaaatactcttaag
caaaatcataatagttttttggaagaatttaaagaaattgattttaatacacaaaatacc
acagaatcatatgaaatagtaaaaagtttattaagcaaatattcaattgatattgaataa
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