Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_50558
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Entry
DICPUDRAFT_50558 CDS
T02090
Name
(RefSeq) DEAD/DEAH box helicase
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_50558
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DICPUDRAFT_50558
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DICPUDRAFT_50558
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
ASCC3_N
AAA_22
DEXQc_Suv3
AAA_19
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
10508608
NCBI-ProteinID:
XP_003292656
JGI:
Dicpu1_50558
UniProt:
F0ZZ16
LinkDB
All DBs
Position
Unknown
AA seq
2139 aa
AA seq
DB search
MGIFDNQNKYEPSLSNTLRVLSTNPPQMFDEQVLQRNKDIMKKRNEKKKEKDRIIEKGQL
TWSYFSDPRQNRDKEKENRAIFNKFKEIVIDMIHDDEIPSDEISSAVYETFMIVSNPHKD
KNSKCESLKQIFHSFFKVQMFTKLNDTVQELLKIKNPFESDILQSKESLQSIDSHESLEW
GAVYDIHYDKDEMSLFDEINHFINTKINNNVDEEAKTRDDEVNTPLSEMVVLHQPGQIKK
AKKLKKLAADGGIAVQQPSSRFTQEWLRNGCLEISEILGIPSEELFNTIMLAIRNKKTTM
EEDLFNLVGYDHFEFVGDVIQNIDSILSSTQSGYISSNHAGPLNHFSIQFKDEKNMDKQM
KKEDKKRFKQQGVVEPPTQQIKLLDTSLHNNIVPSTIYNQKEFPGADITIDVPFSGKIAL
PKGTVRTDKQTHTEVVVPYSQAKPFADNEKLVSIEEEIKENSRKAFGPIKTLNRIQSRVF
DSAYKSNENILISAPTGAGKTNIALLTILHEIESNTNPYGYLDKDNFKIIYIAPLKALAS
EMTEKFSKCLAYLGIVSKELTGDMQLTQKELKDTQIIVTTPEKWDVITRKSSDVALTKLV
RLIIIDEIHLLHEERGPVLECIVARTLRQVETTQEMIRIVGLSATLPNYKDVAKFIRAPA
SGTHYFDSSYRPVPLTQNFIGVKDNHGIMAMKNNMNLLCYERLEKSLKEGHQVMIFVHSR
KDTVKTAEIMTEFAREKNYRFNSDDAPYGAKKEVERAKSKEIRSLFQYGISVHHAGLLRQ
DRNIVEKYFAEGVIRVLVCTATLAWGVNLPAHTVIIKGTQVYDAKNGGFMDLGISDVMQI
FGRAGRPQFDTSGEGFLITSKDKLDHYLMLMSSCMPIESKFITNLEDHLNAEIVLGTVSN
VNEAINWLSYTYLFIRMLQNPLGYGIPHSQRSKDPQLEEFKRDIIIRSARKLEQCKMIRF
DEASENFAMTELGRIASHYYIKHPSIETFNEMLHDQLYQDQILNILSNSSEFENITLREE
ESTELDKLAEEKCFYETTVLDSHSKVKCLLQSYLSRSSIDSFSLVSDSNYTVQNSSRILR
GLFEITMKRGWCGVSKVILDLCKMIDHQQWYFESPLRQMKILQADTLKKIEDKEWSPEDI
CDMEVSELAHVLGNHIIGKATKRVASQFPRLDFEIQVQPITANIIRINIEIIPIFQWNDK
IHGDSQPFWIWIEDSDSQYIFHSEYFMLSKKVFNQNDPIQLSCIIPLPNPMPSQFFCHYI
SDRWLGSEGVREISFRHLVLPQQNRVVNTELLDLQPLPLQALKNKEFESLFKFSHFNPIQ
TQVFHTLYYTNHNVLLGSPTGSGKTICAELAMFKVFRDEPHMKVVYIAPLKALVRERMND
WKVKFQEKLGKKLVELTGDYTPNMIALQNADIVTTTPEKWDGISRNWKNRSYVTSVSLLI
IDEIHLIGELRGPILEVIVSRMNLISQQTGCKIRVVGLSTAMANAIDLSDWMGIDKVGLF
NFRPSCRPVPIEVHIQGFQGKNYCPRMQTMNKPAFAAISTYSPRKPVLIFVSSRRQTRLT
ALDLISYLVVDNDPLQWIAKDFDIEPYLDKIKDAHLRHTLSFGIGMHHAGLSDSDRTICE
KLFGENKIQILISTSTLAWGVNLPAHLVIIKGTEYFDGRTKRYVDFPLTDVLQMIGRAGR
PQFDKEGKAVVMVHDPKKQFYKKFLYDPFPVESHLKEFLHDHINAEIVSGTIQNKQGGIN
WLVNTFFFRRLVVSPSYYGLEDNSVESVNQYLSDLLDKTLGDLEQSRCIEVNDYNEIVPL
SMGKISSFYYLNYRTVQNFSENIRRDSDIKTLLRVLCDAAEYNEFPVRHNEEILNEELNE
KLPIKLSHYENEHTKVHLLLQAHFQRCQLPISDYTTDTKSALDQGIRILQAMIDVAFENG
YLQTAVLTIRLLQMLIQGRWDYDSSLMTLPHFNKEISDFVSSNVLENTQPIENLAQLTNK
VPSDKLRSCILSNGLLSETQTKELINVFEHLPRISIHHTISNDKVFSGQEFNIKVRVTRD
NKKFSNGHAYTPMYSKEKDEGWILVLTNEKEQMVGFKRIPQMISNTITANFKVDQAPFGQ
SSTNYYIKLFSDTYMGLDFFSSIHIKLFDKKEEKLASFN
NT seq
6420 nt
NT seq
+upstream
nt +downstream
nt
atggggatatttgacaatcaaaataaatatgaaccatcattgagcaacactcttagagtt
ttatcaacaaatccaccacaaatgtttgatgaacaagtcttacagcgtaataaagatatt
atgaaaaagagaaacgaaaagaaaaaggaaaaagatagaattatagaaaagggtcaactt
acttggagttattttagtgatccaagacaaaacagagataaagaaaaagaaaatagagca
atttttaataagtttaaagaaattgtaattgatatgatccacgatgacgaaataccatct
gatgaaatttcatctgcagtatatgagacatttatgatcgtgtcaaatcctcacaaagat
aagaattcaaaatgtgaatctttaaaacaaatattccattcattttttaaagttcaaatg
tttaccaaattaaatgacaccgtacaagagttattaaaaatcaagaatccatttgaaagt
gatatattacagtcaaaagaatcattgcaaagtattgattcacacgaatcattggaatgg
ggtgctgtttacgatatacattatgataaagatgaaatgtctttgtttgatgaaattaac
cactttattaacactaaaatcaacaacaatgtcgatgaagaagctaaaactagggatgat
gaagtcaatacaccactaagtgaaatggtagtcttacatcaaccaggacaaatcaaaaaa
gcaaagaaattaaagaaattagctgctgatggtggtattgctgttcaacaaccaagttct
cgattcacccaagaatggttaagaaatgggtgtttagagatctccgaaattttaggtatt
ccaagcgaagaattattcaacactattatgttagcaatcagaaataagaaaacaacaatg
gaagaagatttatttaatttagttggttatgatcattttgaatttgttggagatgttatt
caaaatatagatagtattttatcatcaactcaatcaggttacatctcttcaaatcatgct
ggtccattaaatcatttctctattcaatttaaagacgaaaagaatatggataaacaaatg
aaaaaggaagataagaaacgtttcaaacagcaaggtgttgttgagccaccaactcagcaa
attaaattattagatacaagtttacacaacaatattgtgccatcaacaatctacaatcaa
aaagaattcccaggtgcagatattacaattgatgttcccttctctggtaaaattgcattg
ccaaagggcacagttcgtactgataaacaaactcacaccgaagttgttgttccttattca
caagccaaaccatttgccgataacgaaaaactagtatcaatcgaagaggaaatcaaagag
aatagtagaaaagcttttggtccaattaaaactttaaatcgtattcaatcgcgtgttttc
gattctgcttataaatcaaatgaaaacattttaatctctgctccaactggtgctggtaaa
acaaatattgctcttttaactattcttcatgaaattgaaagcaacacaaatccatatggc
tatttagataaagacaactttaagattatctatatagcaccattaaaagctttagcatcg
gaaatgacagagaagttttcaaagtgtttagcttacttgggtattgtatcaaaagaactc
actggtgatatgcagctaactcaaaaagaactaaaagatactcaaattattgtaactact
ccagagaagtgggatgttataactagaaaaagtagtgatgtagccttaactaaattggta
cgtttaattatcattgatgaaattcatttacttcatgaagaaagaggtccagtattggaa
tgtattgtcgcaagaacacttcgtcaagttgaaactactcaggaaatgattcgtattgtc
ggtttatctgctactttaccaaattataaagatgttgctaaatttattagagctcctgcc
tccggtacacactactttgattcatcatatcgtccagttccattaactcaaaacttcata
ggtgtcaaggataaccatggtattatggcaatgaagaataatatgaatcttttatgttat
gaacgtttagagaaatcgttaaaagaaggtcaccaggttatgatttttgtacactctaga
aaggacactgtaaaaacagccgaaattatgaccgagtttgctcgtgaaaagaactataga
ttcaattcagatgatgcaccatacggcgctaaaaaagaagtcgaaagagctaaaagtaaa
gaaattcgttcattattccaatatggtatctcagtgcatcatgctggtcttctaagacaa
gatagaaatattgtagagaaatattttgctgaaggtgttatcagagtattggtttgtact
gctactttagcttggggtgtcaatttaccagctcatacagttattattaaaggtacacaa
gtttacgatgcaaaaaatggtggtttcatggatttaggtatatctgatgttatgcaaatt
tttggtcgtgctggtcgtccacaattcgacactagtggtgaaggtttccttatcacatcc
aaagataaactggatcattatttaatgttgatgagcagttgtatgccaatcgaaagtaaa
tttattacaaatctcgaagatcatcttaatgctgaaattgtacttggaactgtatcaaat
gttaatgaagccatcaattggctcagttatacttatctttttataagaatgcttcaaaat
cctttaggttatggtatcccacattcacaaagatcaaaagatcctcaattagaagagttc
aaacgtgatatcattattagatccgccagaaaattggaacaatgcaaaatgattcgtttt
gacgaggcatctgaaaactttgcaatgaccgaattgggtagaatcgcttcacattattat
attaaacatccatcaattgaaacctttaacgaaatgcttcatgaccaactttatcaagat
caaattttaaatattctttcaaatagttcagagtttgaaaacattacactccgtgaagaa
gaaagtaccgagctagacaagttagcagaagaaaaatgtttctacgagactactgttctt
gatagtcattcaaaggttaaatgtttattacaaagttatttatcacgttcatcaatcgat
agctttagtttagtaagtgattcaaactataccgttcaaaacagttcaagaattctcaga
ggtctatttgaaattacaatgaaaagaggttggtgtggtgttagcaaggtaattttagat
ctctgcaaaatgattgatcatcaacaatggtatttcgaatcaccattacgtcaaatgaaa
atattacaagcagacacattaaagaaaatcgaagacaaagaatggtcaccagaagacatt
tgtgatatggaagttagtgagttggctcatgtattaggtaatcatatcattggtaaagca
actaaaagagttgcatcacaattcccaagattagactttgaaattcaagtgcaacccatt
acagcaaatattattcgtatcaatatcgaaatcatacctattttccaatggaacgataag
attcatggtgacagccaaccattctggatttggattgaagatagcgatagtcaatatatt
ttccattcagaatactttatgttgagcaaaaaagttttcaaccaaaatgatccaattcaa
ctctcctgtattattccactcccaaacccaatgccaagtcaattcttttgccattatatt
tctgatcgttggttaggcagtgaaggtgttagagaaatttcattccgtcatttagtttta
ccacaacaaaaccgtgtagttaataccgagcttttagatcttcaaccattaccattacag
gcattgaagaataaagaattcgaaagtctctttaaattctcccactttaatccaattcaa
actcaagttttccatactctttactatacaaaccataatgttctcttgggttcaccaact
ggttctggtaaaactatttgcgcagagttagcaatgttcaaagtattccgtgacgaacca
catatgaaggttgtttatattgctccattaaaagccttggttcgtgaaagaatgaatgat
tggaaagttaaattccaagagaaattgggtaaaaaactagtcgaattaactggtgattac
actccaaatatgattgcacttcaaaatgcagatattgttactaccactccagaaaaatgg
gatggtattagtagaaattggaagaatcgtagctatgtaacctccgtatccctattaatt
atagatgaaatccatttaattggtgaattacgtggtccaattttagaagtaatcgtaagt
cgtatgaacttgatttctcaacaaactggctgcaagatccgtgtcgttggtttatccact
gctatggccaatgctattgacttatcagattggatgggtattgataaagtaggtctcttt
aactttagaccatcatgtcgtccagtaccaatcgaggttcatattcagggtttccaaggt
aaaaactattgcccacgtatgcaaactatgaacaaaccagcttttgctgcaatttcaacc
tattcaccaagaaagccagttcttattttcgtatcatctcgtagacaaactcgtttaaca
gctttagatctaatctcttatttagttgtcgataatgacccacttcaatggattgctaaa
gattttgatatcgaaccatatctcgacaaaattaaagatgctcatcttagacacaccctt
tcattcggtattggtatgcatcatgctggtcttagcgactccgatcgtacaatttgcgaa
aaattatttggtgagaataaaattcaaattcttatctctactagtactttggcttggggt
gtaaatttaccagcacacttagttatcattaagggtacagaatattttgatggtagaacc
aaacgttatgtcgatttcccacttaccgatgtacttcaaatgattggtcgtgccggtcgt
ccacaattcgataaagaaggtaaagccgttgtaatggtacacgatccaaagaaacaattt
tataagaaattcctttatgatccattcccagtagaaagtcatcttaaagaatttcttcat
gatcacatcaatgccgaaattgtatcaggtaccattcaaaacaaacaaggtggtattaac
tggttggttaatacattctttttcagaagattggtcgtttcaccatcctattatggccta
gaagataatagtgttgaaagtgttaaccaatacctctctgatctcttggataaaacttta
ggtgatctcgaacaatcacgttgtattgaagttaatgactataatgaaatcgttccacta
tcaatgggtaaaatttcttcattctattatctcaactatagaactgttcaaaacttctct
gaaaatattagaagagatagcgacattaagactctcttaagagttctttgcgatgctgct
gaatacaatgagttcccagttagacacaacgaagagatcttaaatgaagaattaaatgaa
aaactcccaatcaaattatctcattatgaaaatgaacatacaaaggttcatcttctatta
caagctcacttccaaagatgtcagttaccaatatcagattatactacagatactaagtca
gctctcgatcaaggtattcgtattcttcaagctatgatcgatgttgcatttgaaaatggt
tatcttcaaactgctgtattaaccattagattattacaaatgttaattcaaggtcgttgg
gactatgattcatcattgatgacacttccacatttcaataaagaaatctctgattttgtt
tcatcaaatgttttagaaaatacccaaccaatcgaaaatctcgctcaattaaccaacaaa
gtaccatccgataaattaagatcatgcattttaagcaacggcttactctccgaaactcaa
actaaagaacttattaatgtttttgagcatttaccaagaatttcaattcaccatacaatt
tcaaatgataaagttttctctggccaagaatttaatatcaaagttagagtcactagagat
aataagaaattctccaatggacatgcttacaccccaatgtattcaaaagaaaaagatgaa
ggttggattttagtattaactaatgaaaaagaacaaatggttggtttcaagagaattccc
caaatgatttcaaatacaatcacagcaaactttaaagttgatcaagccccatttggtcaa
tcttcaactaattactatatcaaattattttctgatacctatatgggtttagatttcttc
tcctcaattcacatcaaattatttgataaaaaagaagaaaaactagcatcatttaattaa
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integrated database retrieval system
