Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_50564
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Entry
DICPUDRAFT_50564 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03022
Basal transcription factors
dpp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DICPUDRAFT_50564
09124 Replication and repair
03420 Nucleotide excision repair
DICPUDRAFT_50564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpp03021
]
DICPUDRAFT_50564
03036 Chromosome and associated proteins [BR:
dpp03036
]
DICPUDRAFT_50564
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_50564
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DICPUDRAFT_50564
Transcription machinery [BR:
dpp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DICPUDRAFT_50564
Chromosome and associated proteins [BR:
dpp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DICPUDRAFT_50564
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DICPUDRAFT_50564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
SNF2-rel_dom
PspAA
Motif
Other DBs
NCBI-GeneID:
10508625
NCBI-ProteinID:
XP_003292674
JGI:
Dicpu1_50564
UniProt:
F0ZZ26
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MKFFIDDLAVYFPYHYCYPEQYQYMVSLKKSLDEGGPCILEMPSGTGKTVSLLALISSYQ
LVNPTVKLLYCSRTVPEIEQATEEARRVLNYRNSQLGEKAPKTLCISMSSRRNLCIHPRV
SEEREGKIVDSLCRELTSPWNRENPNSERCKFFENFEDKGKEILLEGVYSLEDLKEYGLK
NQMCPYFLDRHVLNFANIVIFSYQYLLDPKIASLVSSSFATNSIVVFDEAHNIDNVCINA
LSVNLDNKILDASLKNVTKINKQIEEIKKVDEKRLKEEYSRLVQGLARSGTNRTEEVSAD
PVLPNDVIQEAVPGNIRKAEHFMSLIKRVIDYLKSRLKSQMVISESPMAFLQGLYHATSI
TSRTLRFCSARLSSLLRTLKINDINAFSGISLIADFATLVGTYNNGFLIIIEPYYQRQNN
TYDQIFQFCCLDASIGMKPIFDRFRSVIITSGTLSPLDIYTKMLNFRPKVIEKLSMSLNR
NCICPCILTRGSDQISISTKFDVRSDTAVVRNYGSLLVEVSAIVPDGIICFFTSYSYMEQ
IVSVWNEMGLLNNILTNKLIFVETSDPAESALALQNYKKACDSGRGAVLLSVARGKISEG
IDFDNQYGRCVILYGIPYINTESKVLRARLEFLRDRYQIRENEFLTFDAMRTASQCVGRV
IRGKSDYGIMIFADKRYNRLDKRNKLPQWILQFCQNQHLNLSTDMAISLSKQFLREMGQP
FTREEQLGKSLWSIEHIEMQPASKPKNHLNGKNTQQDIQNITTTTTTIATTTTSATITTD
DTDTVMNE
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttttattgatgatttagcagtatatttcccataccactattgttatccagaa
caatatcaatatatggtatctctaaagaaatcattagatgaaggtggaccatgtatatta
gaaatgccaagtggcacaggtaaaacagtatcattgttagcattaatttcatcataccaa
cttgttaacccaacagtaaaattattatattgctcaagaacagtcccagaaattgagcag
gcaacagaagaggcaagaagagtattaaactatagaaactcacaattgggtgaaaaagca
ccaaaaacattatgtatatcaatgtcatcacgtcgtaatttatgtatacacccaagagta
agcgaagaaagagaaggtaaaatagtagactcattgtgtagagaattaacctcaccatgg
aatagagagaatccaaactctgaaaggtgtaaattttttgaaaattttgaagataaagga
aaagaaattttattagagggtgtttattcattagaggatttaaaagaatatggtttaaag
aatcaaatgtgcccatactttttagatagacatgttttaaattttgcaaatatcgttatt
tttagttatcaatatttattagatccaaaaattgcatcattggtttcatcatcatttgcc
accaattcaattgtagtatttgatgaagcccataacattgataatgtgtgtatcaatgct
cttagtgttaatttagataataaaattttagatgcctctttaaaaaatgtaacaaagatt
aataaacaaattgaagaaattaaaaaagttgatgaaaaaagattaaaagaagaatatagc
agattggtgcaaggtttagcaagaagtggtacaaatagaacagaagaagtatctgcagat
ccagtattaccaaatgatgttatacaagaagcagttccaggtaatattagaaaagcagag
cattttatgtcattaatcaaaagagttatagattatttaaagagtagactaaaatcacaa
atggtaatatcggaatcaccaatggcgtttttacaaggtttatatcacgcaacatcaatt
acctcaagaacattgaggttctgttctgcaagattaagttcattgcttagaacattgaaa
atcaacgatatcaatgctttttctggcatttcattaatcgccgattttgctactttggtt
ggcacctacaacaatggttttcttattattatcgaaccctattaccaacgtcaaaacaat
acatacgatcaaatttttcaattttgctgtttggatgcatccattggaatgaaaccaatt
ttcgatcgattccgttcagtcatcattacgtctggtaccctatcaccattggatatctac
accaaaatgttaaactttcgtccaaaagtaattgaaaaactatcaatgtcattaaataga
aattgtatatgtccatgtattttaactagaggaagtgatcaaatttcaatctccaccaag
tttgatgtaagaagtgatacagcagtagttagaaactatggttcgctcttagtcgaagta
tctgccattgtgcccgatggtattatttgtttcttcacatcctactcttatatggaacag
attgtcagcgtttggaatgaaatgggtcttctcaataatattttaacaaataaattaatt
tttgtcgaaacctctgaccctgccgaatctgccctagctcttcaaaactataagaaagca
tgtgatagtggtcgtggcgctgtattgctctctgttgctcgtggtaaaatctcggaaggt
attgattttgataatcagtatggtcgttgtgttattctctatggtattccttacatcaac
acagaatcaaaagtattaagagctcgtttagaatttcttagagatcgttatcaaattaga
gaaaacgaatttttaacattcgatgcaatgagaactgcctctcaatgtgtaggtagagtt
attcgtggcaagtctgattacggtattatgatctttgcagataaacgttacaatcgtcta
gataaacgtaataaactaccacaatggattttacaattttgtcaaaatcaacatttaaat
ctttcaactgatatggcaatttcgttatcaaaacaattcttaagagaaatgggtcaacct
tttacaagagaggaacaattgggtaaatcattgtggagtatagaacatattgaaatgcaa
cctgcaagcaaaccaaaaaatcatttaaacggtaaaaatactcaacaggacattcaaaat
attacgacaaccacaaccacaatagcaaccaccacaacatcagcaaccataacaacagat
gatacagatacagtaatgaacgaatag
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integrated database retrieval system
