Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_5561
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Entry
DICPUDRAFT_5561 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03440
Homologous recombination
dpp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DICPUDRAFT_5561
03460 Fanconi anemia pathway
DICPUDRAFT_5561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_5561
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DICPUDRAFT_5561
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
DICPUDRAFT_5561
FA (Fanconi anemia) pathway
Downstream FA components
DICPUDRAFT_5561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_11
Motif
Other DBs
NCBI-GeneID:
10505140
NCBI-ProteinID:
XP_003293824
JGI:
Dicpu1_5561
UniProt:
F1A2C9
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
GHTVKFPFKPYPSQASMMSRILSGLDNKENCLLESPTGTGKTLTLLCSALEWHREDLKKS
NNNNNGSDSDDTDSEDPVENFRPNPSPTIFFCSRTHSQIKQLTEELAKTPYRPNMLVMGS
RDHYCINKELKDVPRKKERCKKIIKDPGCRYYKKEFVLSSISTFRKGGAKQVWDIEDLKK
AGQEHSECPFFVSKDMLPSSDLVFCPYNYLIDPSIRSTLKDKVKNSIVIFDEAHNIEDAL
MDASSFESTLDELYENVFQVLKQIRMNPKIIKNLSPEKEHAINIIHPIMDELVAWIREKS
ESLKPIDFEKHSRVWKGKEILDILQGIGLSESNYFEFSSSVKALSDETDDKQNKKDKLGK
PSAILEEFSKVIEFIFKNANWVDDYVLVLQKQTVLTNSFVKKQQSSKWNLIVSIWALSPR
IAFSSLNSKTHSIILTSGTLSPLYSFPFELASPFPISAEMGNLSDIKNRAWIGTLSHGVR
NEKFLCTHGNTDSFSFQDSLGETIIEHIKIIPSGVLCFFPSYGFLEKITDRWASTGLLDK
INELKPAFAEPKNIKDFNETLIGYRQTVQSNPKKGAILFAVCRGKVSEGIDFSDEYARGV
IVVGIPYPNLKDLRVDL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gggcacaccgtcaagtttccatttaaaccatatccatcgcaggcatctatgatgagcaga
attttatcgggattagataataaagagaattgtttgttagaatccccaacaggtacaggt
aaaactttaactttattatgttcagcattagaatggcaccgagaagatttaaaaaagtca
aataataataataatggttcagatagtgacgataccgatagcgaagatccagtagaaaac
tttagacccaatccatcaccaacaatcttcttttgttccagaactcattcacaaattaag
caattaaccgaggagcttgccaaaaccccatatagacccaatatgttagtaatgggaagc
cgtgatcattactgtatcaataaagaactcaaagatgtaccaagaaagaaagaaagatgc
aaaaagattattaaagatccaggttgccgttattataaaaaggaatttgtattatcatcg
atttcaacttttagaaaaggtggtgctaaacaagtatgggatattgaagatttaaaaaaa
gcaggtcaagaacattccgaatgcccattttttgtttcaaaagatatgctaccatcctca
gatcttgtgttttgtccatacaactatttaattgatccctccattcgtagtacactcaaa
gataaagtcaaaaactcaattgttatattcgacgaagcacataatattgaagatgccctt
atggacgcaagcagttttgaatcgactcttgatgaattgtatgagaatgtttttcaagtt
ttaaaacaaattagaatgaacccaaaaatcatcaaaaatttaagcccagagaaagagcat
gctatcaatattattcatccaattatggatgaactagtagcttggattcgtgaaaaatcg
gaatcattaaaaccgatagactttgaaaagcattcaagagtttggaaaggtaaagaaatt
ttagatatactccaggggattggtttaagcgaatcgaactactttgaattttcatcgtct
gtcaaagcactatccgatgaaaccgatgacaaacaaaacaaaaaagataaattaggtaaa
ccatctgcaatattagaagagttttcaaaagttatagaatttatatttaaaaacgcaaat
tgggtagatgattatgttttggtattacaaaaacaaacagtactcacaaattcatttgta
aagaaacaacaaagctctaaatggaatcttatagttagtatttgggcactaagtccaaga
attgctttctcttctttgaattcaaaaacccattcaatcattttgacatcgggtacactt
tcaccactatacagctttccatttgaattggcatcaccattcccaatatcagcagaaatg
ggtaatttatcagatattaaaaaccgtgcatggattggtacactctctcatggcgtcaga
aatgaaaagtttttatgtactcatggtaataccgattcatttagctttcaagattctttg
ggcgaaactattatagaacatattaaaataattccaagtggtgttttatgctttttccca
tcatatggatttttagaaaagataactgatagatgggctagtactggacttttagataaa
attaacgaattaaaaccagcatttgcagaacccaaaaatatcaaagactttaatgaaaca
ttaattggataccgtcaaaccgttcaaagtaaccccaaaaaaggtgctatattatttgct
gtatgtcgtggtaaagttagtgaaggtatagatttctctgacgaatatgcaagaggtgtt
attgtagttggtataccctatccaaacctaaaggatcttcgtgtggattta
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