Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_56694
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Entry
DICPUDRAFT_56694 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_56694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_56694
03009 Ribosome biogenesis [BR:
dpp03009
]
DICPUDRAFT_56694
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DICPUDRAFT_56694
Spliceosome [BR:
dpp03041
]
Complex A
U2 snRNP components
U2 related factors
DICPUDRAFT_56694
Complex B
DICPUDRAFT_56694
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
DICPUDRAFT_56694
Ribosome biogenesis [BR:
dpp03009
]
Eukaryotic type
90S particles
Helicases
DICPUDRAFT_56694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
ResIII
nSTAND3
ABC_tran
PhoH
AAA_24
SLFN-g3_helicase
Cas3-like_C_2
TsaE
Flavi_DEAD
AAA_30
AAA_7
T2SSE
AAA_29
Motif
Other DBs
NCBI-GeneID:
10504793
NCBI-ProteinID:
XP_003290437
JGI:
Dicpu1_56694
UniProt:
F0ZSN2
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MSKRKNDSGDTNKKAMKKQELETTEISTNSSTTDNKANLNINDWIPKKETYSKRYYEILE
KRKELPVWKQKEDFINMVKKNQVVVLVGETGSGKTTQIPQFVVDAGLISPGKMVGVTQPR
RVAAISVAKRVSEEMDFELGQEVGYSIRFEELSSPKTFMKYLTDGMLLRESMGDPTLSRY
DVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFEGAPLIKVPG
RLHPVEIFYTEKAERDYLEAAIRTVVEIHKHEDEGDILVFLTGEEEIEDTCAKIQREVRE
GRLAPLKCLPLYSTLPIYQQSKIFDSVKERKCIVSTNIAETSLTIDGIVYVVDPGFSKQK
TYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFQEDLIQQTYPEILRS
NLASVVLQLLKLGVTDLVHFDFMDPPVPDTLIRALEVLHFLGALDDEGQLTKVGTIMAEF
PLDPQLSKMLIESSERSCSNEILTISAMLSAPNVFMRPKDNRLEADASKKNFDHFDGDHL
TLLNVYHAFKKNGEDPTWCYENFLNHRALKQADSVRSQLARILTRFKLQLVSGDVNSRQY
YQNIKKCLVAGFFMQVAKLEKKNIYFTLGDEQQVIFHPSTGLTRKPEWVIYNEFVLTSEN
YIRTVTDIKFEWLSEVAPGYIKQKSFPKKTKEAIQRNLKYTK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagaaaaaacgattcaggtgataccaataaaaaagcaatgaaaaaacaagaa
ttagaaactacagaaatatcaacaaatagcagtactacagataataaagctaatttaaat
ataaacgattggattccaaaaaaagaaacctattcaaagagatattatgaaattttagaa
aaaagaaaagagttaccagtatggaagcaaaaagaagattttataaatatggttaaaaag
aatcaagttgtagtattagttggtgaaactggttctggtaaaaccactcaaattccacaa
tttgttgtcgatgcaggattaatatcgccaggtaaaatggttggtgtaacacaaccaaga
agagttgcagcaattagtgtagcaaaaagagtatcagaagaaatggatttcgaattaggt
caagaagttggttattcaattcgtttcgaagagttatcgtcaccaaaaacatttatgaaa
tatcttactgatggtatgttactccgtgaatctatgggtgatccaactttatcaagatac
gatgttatcattttggatgaagctcacgaacgtacacttagtaccgatattttatttggt
ttaattaaagatattttaaagagacgtaaggacctcaaactcattgttatgtctgctaca
ttggaagctggtaaatttcaaaaatatttcgaaggtgctccattaatcaaggtaccaggt
cgtttacatccagtagagattttttatacagaaaaagcagaaagagactatttagaagca
gcaattagaactgttgtcgaaattcacaaacacgaagacgaaggtgatattttagtgttt
ttaactggtgaggaagaaattgaagatacttgcgcaaaaattcaaagagaggtacgtgag
ggacgtttagcaccactcaagtgtttaccattatactccactttaccaatttatcaacaa
agtaaaattttcgattcagtcaaggaacgtaaatgtatcgtttcaaccaatattgccgaa
acctctcttacaatcgatggtatcgtttatgtagtagatccaggtttttcaaaacaaaaa
acatataatccacgttcacgtgttgagtcacttttagttgcaccaatttctaaagcctca
gctaatcaaagagctggtcgtgctggtcgtacacgtccaggtaaatgtttccgtctttat
accgaaaaagcattccaagaagatttaattcaacaaacctacccagaaattcttcgttct
aatttagcctctgtagtattacaactcttaaaattaggtgttactgatttagtacatttc
gatttcatggatccaccagtaccagatacattaattcgtgcacttgaagttcttcatttc
ttgggcgcattagatgacgaaggccaattaactaaagttggtaccattatggcagagttc
ccattagatccacaactcagtaaaatgttaattgaaagtagcgaacgtagttgctccaac
gaaattttaactatatccgcaatgttatctgcaccaaatgtttttatgcgtccaaaagat
aatagattagaggctgatgcttctaaaaagaactttgatcatttcgatggtgatcatctt
actcttctcaatgtttatcatgccttcaaaaagaatggtgaagatccaacctggtgttat
gaaaactttttaaatcatcgtgccctcaaacaagctgatagtgttcgttctcaattagca
agaattcttacaagattcaaattacaattggttagtggtgatgtaaatagtcgtcaatac
tatcaaaatattaaaaaatgtttagttgctggtttctttatgcaagtcgccaaacttgaa
aagaaaaatatttatttcactcttggtgatgaacaacaagttatcttccatccttcaact
ggtctcactcgtaaacctgaatgggttatctacaatgaatttgtattaacctctgaaaat
tatattagaactgttaccgatatcaaatttgaatggttatctgaagtggctccaggttat
attaaacaaaaatcattcccaaagaaaacaaaagaagcaattcaaagaaatttaaaatat
actaaataa
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