Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_76545
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Entry
DICPUDRAFT_76545 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_76545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_76545
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DICPUDRAFT_76545
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
DICPUDRAFT_76545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
10499043
NCBI-ProteinID:
XP_003285627
JGI:
Dicpu1_76545
UniProt:
F0ZDX9
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MESNDNNLTNINIEIFSPQKRMKLKHYQQQHTQVKAEDNDIIMESEESELFSSKRLVIPG
QIISREGEYLKGHGTFHNGSNLIASVCGTLDKVDRLISVKALKSRYHGEVGDIIVGRITE
ISSKRWKVDVNSRLDYILMLSAINLPGGIQRRRTSADELQMRNFFVENDLVYAEVQMIMG
DGSVAIHTRNQKYGKLQNGHFMKVTPSLIKRSKQHFYSLECGVDVILGLNGYIWIADTEQ
QKNQSAFIQKHEKENFDQACIIPDDIKQISKDSRDRISRVKNSIALLEKGFLLIHSKSIM
QVYHLSNKMKLGAKDLLHPQYIKQILTLLSTEYNDDIKDEE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaatgataataatttaacaaatataaatatagagattttttcacctcaaaag
aggatgaaattaaaacattatcaacaacaacacacacaagttaaagcagaagataatgat
ataataatggagtcggaagagtcagagttattttcaagtaagagattggttatacccggt
caaattatatcgagagagggcgagtatttaaagggtcatggtacatttcataatggaagt
aatttgatagcatcggtatgcggcacattggataaagttgatagattaatttcagttaaa
gcattaaaatcccgttatcacggcgaagtgggcgatattatagttggtagaatcaccgag
atctcatcaaagcgttggaaagtggatgtaaattcacgtttggattatatattaatgtta
tcagctatcaatttaccaggtggcattcaaagacgtcgtacctctgcagatgaactccaa
atgagaaatttctttgtagagaacgatttagtgtatgccgaagtccaaatgataatgggt
gatggttcggtcgccattcacacacgtaatcaaaaatacggtaagctccaaaatggccat
tttatgaaggtaacaccatctttaatcaaacgttcaaaacaacacttttattcattagag
tgtggtgtagatgtaattttaggtcttaatggttatatttggattgcagacactgagcaa
caaaagaatcaatcagcattcattcaaaaacacgaaaaagaaaatttcgaccaagcatgt
atcataccagatgacattaaacaaatttcaaaagattcaagagaccgtatatctcgtgta
aaaaattcaatcgccttattagaaaaaggtttccttttgattcacagtaaaagtataatg
caggtttaccatttatcaaataaaatgaaattaggtgccaaagatttattacacccacaa
tatataaaacaaattttaactttattatcaacagagtacaatgatgatattaaagatgaa
gaataa
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integrated database retrieval system
