Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_78987
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Entry
DICPUDRAFT_78987 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICPUDRAFT_78987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpp03041
]
DICPUDRAFT_78987
Spliceosome [BR:
dpp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
DICPUDRAFT_78987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
WD_LRWD1
KBP_C
Herpes_UL37_1
Motif
Other DBs
NCBI-GeneID:
10501597
NCBI-ProteinID:
XP_003288167
JGI:
Dicpu1_78987
UniProt:
F0ZL79
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MENGNKRVYFGQIKKDSVKQVEQNNIPISQDEDNEEDGVQFLPFSKHVQKSHELHKKSLD
DYERKKRAKQVIVPTNDNLVKLKLRELGEPIILFGEKPEDRRNRLRELLIDKNILDGTPI
ALKKEEPEESEEEKENFLTQGTKELEEARIKIALYSLKKSQKRLQENKRQRDKELEIKKQ
NDELFKSHGGVIVGRVEQMMVDRTKTDFELARDKTRKELKDYYASTSQVGDDRPLSMAVF
SPNSQLIAISSWGGQSKLWNIKGEHLQTFTGHTQRASSIAFHPQSTLSISENSVNIATTS
ADSTCKLWSLSSETPLASLEGHLDVVNRCAFHPNGRYLMTSSNDKSWRMWDLESQNTCIL
DQEGHSGAVMGIAVQEDGSLLSTGSQDGLVRVWDLRSGRPILYFEGHSKQVISVDWSPNC
YHIASSSEDNTTIIWDIRKKEKAYQILAHSSIVSCVKYQKSNNSSTSIGYLATSSFDGKI
KCWEPYTWKPITTLEGHSSKVTSVDIANDNSKIVSTSFDKTWKIWSNEN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggtaataaaagagtttattttgggcaaattaaaaaagatagtgtaaaacaa
gtagaacaaaataatatacccatatctcaagatgaagataatgaagaggatggtgttcaa
tttttaccattctcaaaacatgttcaaaaatcacacgagttgcataaaaaatcattggac
gactacgaaagaaaaaagagagcaaagcaagttatagtgccaacaaatgataatttagta
aagttaaaacttcgtgaattgggtgaaccaattatattatttggtgaaaagccagaggac
aggagaaacagattaagagagttattaatagataaaaatatattagatggtacaccaata
gcattaaaaaaagaagaacctgaagagtccgaagaagaaaaagagaattttttaacacaa
ggtactaaagaattagaagaagcaagaattaaaatagcgttgtattcactaaagaaatct
caaaaaagattacaagaaaataaaagacaaagggataaagagttggaaataaagaaacaa
aatgatgaactatttaaatcacatggtggtgttattgtaggtagagttgaacaaatgatg
gtagatagaacaaaaacagattttgaattggcaagagataaaacaagaaaagaattaaaa
gactattatgcatcaacaagtcaagttggtgatgatcgtccattatcgatggctgttttt
tcaccaaactctcaattaattgcaatttcttcatggggtgggcaatcaaaactatggaat
attaaaggtgaacatcttcaaacatttacaggacatacccaaagagcaagtagcatagca
ttccatccacagtcaaccttatccatctcagagaattctgtcaatattgcaaccacatca
gccgactccacttgcaaactttggtcactttcaagtgaaactccattagcgtcattagaa
ggtcatttggatgttgtaaatagatgtgcattccatccaaatggtagatatttaatgact
agttcaaacgataaaagttggagaatgtgggatcttgaatctcaaaatacatgtatatta
gatcaagaaggtcattcaggtgctgtaatgggtatagcagtccaagaagatggctcactt
ttatcaactggttcacaagatggtttagttcgtgtttgggatttaagatctggtagacct
atactctattttgaaggtcattctaaacaagttatatctgttgattggtcacccaattgt
taccatatagcctcctcatctgaagacaatacaaccataatatgggatataagaaaaaaa
gaaaaagcctatcaaattttagcccactcttcaattgtatcctgtgttaaatatcaaaaa
tcaaataatagttcaacatcaataggttatttagcaaccagttcttttgatggtaaaatt
aaatgttgggaaccttacacttggaaaccaatcactacattagaaggccattcctcaaaa
gtaacctctgtagatattgcaaatgataattcaaaaatagtttcaacctcatttgataaa
acttggaaaatttggtcaaatgaaaattaa
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