Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_85413
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Entry
DICPUDRAFT_85413 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03013
Nucleocytoplasmic transport
dpp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DICPUDRAFT_85413
03015 mRNA surveillance pathway
DICPUDRAFT_85413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_85413
Enzymes [BR:
dpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DICPUDRAFT_85413
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
DICPUDRAFT_85413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
Cas3-like_C_2
FakA-like_C
DUF1811
CMS1
Motif
Other DBs
NCBI-GeneID:
10510851
NCBI-ProteinID:
XP_003294974
JGI:
Dicpu1_85413
UniProt:
F1A5N0
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MSETDKKTEQVEEKDNVEEIDDTQNNDDDLFNVQLEIQQSDPNSPLYSIKSFNELGLKPE
LLKGVYAMGYNKPSKIQEAALPIIVQSPNNLIAQSQSGTGKTAAFTLGMLNCVDPAIDAP
QAICISPTKELAQQTFDVISKIGQFSDIKPLLYVPELDLPAVVKNQVIIGTPGKILTHIL
NRKLSIKHLKMVVMDEADFIVSMENVPTQIQQIHRLLPKQIKICLFSATFSQGVENLIKN
VVPEPNVDIRLKKSDLGLQRIHQYFIDCGSESNKPFILSDLYGFISIGQSIVFVHTIQTA
KTLYEKMKEDGHSVSILYGKDLSTEARFEHLKNFREGKSKVLISTNVLARGIDIPQVSLV
VNYDIPLDENARPDPVHYLHRIGRVGRFGRSGVAITFVHDQSSKTKLNNIIEHLGHHIEE
INASELEQLDGILKGIRNQLTPLNN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaactgataaaaaaacagaacaagttgaggaaaaagataatgttgaagagatt
gatgatactcaaaataatgatgatgatttatttaatgttcaattagagattcaacaaagt
gacccaaattcaccattgtattcaattaaaagttttaatgagttgggattaaaaccagaa
ttattaaaaggtgtatatgcaatgggttataataaaccatcaaaaattcaagaagcagca
ttaccaattattgttcaatcaccaaataatcttattgctcaatcacaatcaggtacaggt
aaaactgcagcattcacattaggtatgcttaattgtgtcgatccagctattgatgcccct
caggcaatttgcattagtccaactaaagaattagctcaacaaacttttgatgtaatttca
aaaattggtcaattttcagatataaaaccattattatatgtaccagagcttgatttacca
gcagtagttaaaaatcaagttattattggaacaccaggtaaaattttaacccatatttta
aatagaaaattatcaattaaacatttaaagatggtggttatggatgaagcagattttatt
gttagtatggaaaatgtaccaactcaaattcaacaaattcatagattattaccaaaacaa
attaagatttgtttattctctgcaacttttagtcaaggtgttgaaaatttaataaaaaat
gtagtaccagaaccaaatgtcgatattagattaaagaaatcagatttaggtcttcaaaga
attcatcaatattttatcgattgtggcagcgaatcaaataaaccatttattttatcagat
ctctatggatttattagtattggtcagagtattgtatttgttcataccattcaaacagca
aaaacactttacgagaaaatgaaagaagatggtcattcagtttcaattttatacggtaag
gatttatcaaccgaagcacgttttgaacatttgaaaaactttagagagggtaaatccaaa
gttttaatctctacaaatgttttggcaagaggtatcgatattccacaagtctcattggtt
gtaaattacgacattccacttgatgaaaatgcaagacctgatccagtccattatcttcat
cgtattggtcgtgtcggtagatttggtcgttctggtgtagctatcacttttgttcatgac
caatcatcaaaaaccaaattaaataatataatagaacatttaggtcaccacatcgaagag
attaatgcttctgaattagagcaattagatggtattcttaaaggaataagaaatcaatta
actccattaaataattaa
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