Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_85962
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Entry
DICPUDRAFT_85962 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_85962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_85962
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DICPUDRAFT_85962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
10509652
NCBI-ProteinID:
XP_003283749
JGI:
Dicpu1_85962
UniProt:
F0Z8I4
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MVKKQEFRRLNGRTQGQLRSMESEQSLLNKADGSAKFSQNKTSVLAAVYGPIEVNSARKE
KILKSYVEVTFTPALGNTTYLDKEKELLVKNAVESVILTTLHPRTQVSVIIQVYSDDGSI
VSCSINAACLALLDAGIEMNGLIGSITLMNEDDDEDNNKCLMIVDPDLNEENNSKAMAIF
AFSSNSNNIVMSKTIGTLTEDQYFECLKAARGCDSIIAYMKLAVKNRIMGQNN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaaacaagaatttagaagattaaatggcagaactcaaggtcaattaaggtcg
atggagtcagaacagtcattattaaataaagcagatgggtcagcaaaattcagtcaaaat
aaaacatcagtattggcagcagtttatggaccaatagaagttaatagtgcacgtaaagaa
aaaattttaaaatcatatgtcgaagttacattcacaccagcattaggtaacacaacatat
ttagataaagaaaaagaattattagttaaaaatgcagttgaatctgttattttaactaca
ttacacccaagaactcaagtttcagttattattcaagtttattcagatgatggttcaatt
gttagttgctcaattaacgcagcatgtttagcattgttagatgctggtatagaaatgaat
ggattaattggatcaattacattaatgaacgaagacgatgatgaagataataataaatgt
ttaatgatagtcgatccagatctcaacgaagaaaacaattctaaagcgatggcaattttc
gcattttcaagtaattcaaataatatagtgatgtcaaaaacaattggcactttaacagaa
gatcaatattttgaatgtttaaaagctgcaagaggctgcgacagcattattgcatatatg
aaattagctgttaaaaatagaataatgggtcaaaataattaa
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