Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_88747
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Entry
DICPUDRAFT_88747 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DICPUDRAFT_88747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_88747
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DICPUDRAFT_88747
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
DICPUDRAFT_88747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
10504328
NCBI-ProteinID:
XP_003289985
JGI:
Dicpu1_88747
UniProt:
F0ZRE0
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MSKLSYISPEGLRIDGRRANELRRINIQMGVSNRADGSAYYEQGNTKIIAAVYGPREISV
SGQSIFDRAIVKCEFATSSFSTTERKPQQKTKGDRATTEISNLVKQAFESTIQTHLYPRS
QINIYIQVLQSDGGLKAAAINASTLALIDAGISMKDFVCAVSTSCIDGVAVLDLNHIEER
SGGPDCLLSIQPQIGGVISLNMDSKVPQDLFESVLELGEKGCKKIFSILSDQVKKYSTDL
ISNQLKI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattatcatatatttcaccagaaggtttaagaattgatggtagaagagcaaat
gaattaagaagaattaatattcaaatgggtgtttcaaatagagcagatggatcagcatat
tatgaacaaggtaatactaaaattatagcggcagtttatgggccaagagagatatcggtc
agtggtcaatctatttttgatagagcaatcgtaaaatgtgaatttgcaactagcagtttt
agcacaacagaaagaaaaccacaacaaaaaaccaaaggtgatagagcgaccacagaaatt
tcaaatctagtaaaacaagcattcgaatcaactatacaaactcatttatatccacgttca
caaattaatatttatatacaggttttacaatcggatggtggccttaaggctgctgctatc
aatgcttccacattggcattgatcgatgcaggtatttcaatgaaggattttgtatgtgct
gttagtacaagttgtatcgatggtgttgccgttttagatttaaatcatattgaagagcgt
tcaggtggacctgactgtcttttatctattcaacctcaaattggtggtgttatctcttta
aatatggattcaaaagtcccacaagatttatttgaatcagttttagaattaggtgaaaag
ggttgtaaaaaaatattttcaattttatcagatcaagttaaaaaatattcaactgattta
atttcaaatcaattaaaaatataa
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