Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_89712
Help
Entry
DICPUDRAFT_89712 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DICPUDRAFT_89712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpp03021
]
DICPUDRAFT_89712
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_89712
Transcription machinery [BR:
dpp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DICPUDRAFT_89712
Messenger RNA biogenesis [BR:
dpp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DICPUDRAFT_89712
U7-dependent histone pre-mRNA processing factors
DICPUDRAFT_89712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
10505936
NCBI-ProteinID:
XP_003292192
JGI:
Dicpu1_89712
UniProt:
F0ZXP5
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MASEESKDLIISLLNGANSSERDKQDYLASAYELIFHKEPILLDEFYASFVDFALDRSKA
VKIQIIPYIESICKKYPKYFSISNLNLLLTSDIKSVVKRTILCITNLIRAVLFYIVQSPQ
SDQIYQVWNSFNIVKDHIVKLSISSEDESIRTSAFKMLEVLILSYSSPSEYKQSKKYKSD
EEFSLDKVPSNHYLISKSSLNKECETYLNILLDSAKDLKNMTSQNIMTLVTSLTNILRQR
FSMLPKIITVICQCPNIVPRFQTVQQESVRHTLKVSLLSIIRLKKKDLLAPYMQDLIQAC
NKIDSKDAAEEAARWFFSDNDSDKKKRHFESSHDSSNKKKSKTEHVYGVNNNVIDYQQSG
NNSNDNNNSNNNNNNSSNNINNINNGNFVEKPGLLMDSDTLSKIIDTIEFLNPDFVRELV
IENMSHVPIFGLLQGIPQSCPGFKEITEFLNSYQNKNIQPVQFVNNFQQRQPFPNQPYMG
GYKSPALQPQPQQGAPNQPFILSPPVPPSQSTFHKQQQQKIQQNQPPKIPPQFNLQQTQP
NTLPLQPVYDNESDDEVDDETPLFKEEIKNVDDDDESESEEKEMVKKEENTADQINESNT
IDSIGKAEIIPSVTPRPVFKIPPLTPERAKHIGDSALMRIKICEPGIITTGKHHLWTSIL
GRILSLRPDQENIEELDEFVPFIVEDFQNHREFALQWLYNELFIAKQILPTFSPDSMKRY
TNLLRKLIKYMRKHFPPKDPEIGLFILDVPYITDQLLHSINCKVVAEAQGLIYTSSKWDL
NKVFSNEHNVITKPKPPTAEAEENGTTASENGNVSDSPDQTPIDQKTLQEKESEWLPAGL
AILRDLILWRPTVRTQCLNSLLEFSTSKDDTVRAPSINLIANQLYIRPSLQETIHNFAKE
QILLLNKYKDRLDEEMKTQKTKDPSIKFSELMNQDDSDSETELKIKIEKDDTIKIKEEDD
EVMKEDQQEPEQNQDLDQEKEKEEKVIKESPSATNDTGEKIYPEPIQKEIKKFIETRVTL
FFSLIIKNHQLLSDLLELYPSYNSITQDVVKRLAGFVIKHIGQSGITSSLLQVISVCPVG
SENLTIEVLNSLVASEKPSQELVDSVKSLLLTNNDLRFLLPVVKGLKKEEIISRLPSFIS
LPNKEDSKQFILVLASGDSPISASELLVQLHLISNESLLKNVIDSIDYCLSITDTFKQEI
VAASINQLMAQSQLPKFFMRTILKTLQIHPRLKTFVVEILSRLVAKQVWNDKTLWDGFIY
CAKLAKPESLEVVLQLPPPQFEMACSNSDLKNIIIKFLKDNDPKNYPKQNIKILNIK
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaagagtcaaaagacttaataatttctttattaaatggggctaatagctca
gaaagagataagcaagattatttagcaagtgcctacgaattaatttttcataaggagcca
attttattagacgagttttatgcaagttttgtagatttcgctctcgataggtccaaagca
gtgaaaattcaaattataccttatatcgaatcaatatgtaaaaaatacccaaaatatttc
agtatatcaaatttaaacttattattaacgagtgatataaagtcagttgttaaaagaaca
atattatgtataacaaatttaataagagcagttttattttatatagttcaatcaccacaa
agtgatcaaatttatcaagtttggaattcattcaatattgttaaagatcatattgtcaaa
ttaagtatttcatcagaggacgagtcaattagaacgagcgcatttaaaatgcttgaggtt
ttgatattatcatattcctcaccaagcgaatataaacagtctaaaaagtataaatcagat
gaagagttttcattagataaggtaccatcaaatcattacctcatttcaaaatcatcccta
aacaaagaatgcgaaacatatttaaatattttattagatagcgcaaaggatttaaagaat
atgaccagccagaatataatgacattagttacatcattgaccaatattttaagacagaga
ttttcaatgttacctaaaattataacagtaatttgccaatgcccaaatatagtgccaagg
tttcaaacagttcaacaagaaagcgttagacacacattaaaggtttcattattatcaatt
atacgtttaaagaaaaaggatttacttgcaccatatatgcaagacttaattcaagcctgt
aacaaaattgattcaaaggatgccgctgaagaagctgccagatggttttttagtgacaat
gattctgataaaaagaaaagacattttgaaagttcacacgattcgtcaaataaaaagaaa
tcaaaaactgaacatgtatatggggttaataataatgttatagattatcaacaatcaggt
aataatagtaatgataataataatagtaataataataataacaatagtagtaataatata
aataatataaataatggtaattttgttgaaaagcctggcttattaatggatagtgatact
ctatcaaagataatagatactatcgaatttttaaatccagattttgttagagaattagtt
atagaaaatatgagccatgttcctatatttggtttattacaaggtataccgcaaagttgt
ccaggttttaaagaaattacagagtttttaaattcctatcaaaataaaaatattcaacct
gttcaatttgttaataattttcaacaaagacaaccatttccaaatcaaccatatatgggt
ggttataaatcacctgctttacagcctcagccacaacagggggcaccaaatcaaccattc
atactttcaccaccagtaccaccttcacaatcaacatttcacaaacaacagcaacaaaag
atacagcaaaatcaaccaccaaaaataccaccacaatttaatttacaacaaacacagcca
aatacactacctttacaaccagtttatgataatgaatctgacgatgaagttgatgacgaa
acaccattatttaaagaagaaattaaaaacgttgatgatgacgatgagtccgaatccgaa
gaaaaagaaatggttaaaaaagaagaaaacacagcagatcaaattaacgaaagcaataca
atcgattcaattggtaaagctgaaattataccttcagtcacaccaagaccagtattcaaa
atccctccattaactccagaacgtgcaaaacatattggtgactcagcattaatgagaatt
aaaatttgcgaaccaggcattataacaacaggcaaacaccatctttggacttcaatatta
gggcgtattctttcattaagaccagaccaagagaacattgaagaattggatgagtttgtt
ccatttattgttgaagattttcaaaatcatagagaatttgcattacagtggttatataac
gaattatttattgcaaagcaaattttaccaacttttagccccgactcaatgaaaagatat
accaatctcttaagaaagctaatcaagtatatgcgaaaacactttccaccaaaagaccca
gaaattggtttattcattctcgatgttccatatattaccgatcaattattacattcaata
aattgcaaagtggttgctgaagcccaaggtttaatttatacaagttcgaaatgggattta
aataaagtattttcaaatgaacataatgttattacaaaaccaaaaccaccaactgcagag
gcagaggagaatggtacaacagcatcagagaatggtaatgttagcgatagcccagatcaa
actccaattgatcaaaaaacacttcaagaaaaagaaagtgagtggttaccagcaggttta
gcaattctaagagatttaatactttggagaccaactgtacgtacacaatgccttaatagt
ttattggagttttcaacatctaaagatgatactgttcgtgcgccatcaattaatttaatt
gcaaaccaactttacattagaccatctcttcaagaaactattcacaattttgcaaaagaa
caaattttacttttaaataaatataaagatagattggatgaagaaatgaaaactcaaaaa
acaaaggatccatcaattaaatttagtgaattaatgaaccaagacgatagtgatagcgaa
acagaattaaaaattaaaatcgaaaaggatgatactattaaaattaaagaggaggatgat
gaagttatgaaagaggatcaacaggagccagagcaaaaccaagatctagaccaagaaaaa
gaaaaagaggaaaaagttattaaagaatcaccatcagcaacaaacgatactggcgagaaa
atttatccagaaccaattcaaaaagaaattaaaaagtttattgaaacaagagtaactctt
ttcttttcattaatcatcaaaaatcatcaattattaagtgacttattagagctttatcca
agctataactcaataacccaagatgttgtaaaaagattagcgggattcgttattaaacac
attggtcaaagtggtattacttcatcgcttttacaagttatttctgtttgtccagttggt
tcagagaatcttactatcgaggtattaaattcattggtagcttcagaaaaacctagtcaa
gagttggtcgattcagtaaaatcattactattaacaaataatgatttaagattcctctta
ccagttgttaaaggtttaaagaaagaagaaattatcagtagattaccatcattcatttca
ttaccaaataaggaagattccaaacaattcattttggttttagcatctggtgactcacct
atttcagcatcagaacttttagttcaacttcacctaatttctaatgaatcattattaaag
aatgttattgactctatcgactactgtttatcaattacagacacctttaaacaagaaatt
gttgcagcatctatcaatcaattaatggctcaatcccagttaccaaagttctttatgaga
actattttaaaaactcttcaaattcatccacgtttaaaaacatttgttgttgaaatactc
agtcgtttagtcgcaaaacaggtatggaacgataagacactatgggatggtttcatttat
tgtgccaaacttgcaaaaccagaatcattagaagtagttctccaacttccaccaccccaa
ttcgaaatggcctgtagtaatagcgatcttaaaaatataattatcaaattcttaaaagat
aacgatccaaagaactatccaaaacaaaatattaaaatattaaatattaaataa
DBGET
integrated database retrieval system
